Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMCN2Q8NDA2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMCN2Q8NDA2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.3■□□□□ 0.36
HMCN2Q8NDA2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMCN2Q8NDA2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMCN2Q8NDA2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMCN2Q8NDA2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HMCN2Q8NDA2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.23■□□□□ 0.35
HMCN2Q8NDA2 AL162393.1-201ENST00000437852 946 ntBASIC17.22■□□□□ 0.35
HMCN2Q8NDA2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC17.22■□□□□ 0.35
HMCN2Q8NDA2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.21■□□□□ 0.35
HMCN2Q8NDA2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMCN2Q8NDA2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMCN2Q8NDA2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC17.2■□□□□ 0.34
HMCN2Q8NDA2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.18■□□□□ 0.34
HMCN2Q8NDA2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HMCN2Q8NDA2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.15■□□□□ 0.34
HMCN2Q8NDA2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMCN2Q8NDA2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMCN2Q8NDA2 HLA-V-202ENST00000446817 847 ntBASIC17.14■□□□□ 0.33
HMCN2Q8NDA2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.14■□□□□ 0.33
HMCN2Q8NDA2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC17.13■□□□□ 0.33
HMCN2Q8NDA2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMCN2Q8NDA2 SETD8P1-201ENST00000623146 1180 ntBASIC17.11■□□□□ 0.33
HMCN2Q8NDA2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HMCN2Q8NDA2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMCN2Q8NDA2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.1■□□□□ 0.33
HMCN2Q8NDA2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMCN2Q8NDA2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.08■□□□□ 0.32
HMCN2Q8NDA2 ABHD17AP4-201ENST00000411545 909 ntBASIC17.06■□□□□ 0.32
HMCN2Q8NDA2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMCN2Q8NDA2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMCN2Q8NDA2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.03■□□□□ 0.32
HMCN2Q8NDA2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMCN2Q8NDA2 AP006261.1-201ENST00000584783 668 ntBASIC17.01■□□□□ 0.31
HMCN2Q8NDA2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC17.01■□□□□ 0.31
HMCN2Q8NDA2 MIR7108-201ENST00000614319 87 ntBASIC17.01■□□□□ 0.31
HMCN2Q8NDA2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC17■□□□□ 0.31
HMCN2Q8NDA2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMCN2Q8NDA2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HMCN2Q8NDA2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMCN2Q8NDA2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMCN2Q8NDA2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMCN2Q8NDA2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.96■□□□□ 0.31
HMCN2Q8NDA2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.92■□□□□ 0.3
HMCN2Q8NDA2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HMCN2Q8NDA2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMCN2Q8NDA2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMCN2Q8NDA2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HMCN2Q8NDA2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC16.9■□□□□ 0.3
HMCN2Q8NDA2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
HMCN2Q8NDA2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMCN2Q8NDA2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMCN2Q8NDA2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.87■□□□□ 0.29
HMCN2Q8NDA2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMCN2Q8NDA2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC16.86■□□□□ 0.29
HMCN2Q8NDA2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.85■□□□□ 0.29
HMCN2Q8NDA2 CAHM-201ENST00000604200 896 ntBASIC16.84■□□□□ 0.29
HMCN2Q8NDA2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMCN2Q8NDA2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC16.84■□□□□ 0.29
HMCN2Q8NDA2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HMCN2Q8NDA2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC16.83■□□□□ 0.28
HMCN2Q8NDA2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.83■□□□□ 0.28
HMCN2Q8NDA2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMCN2Q8NDA2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMCN2Q8NDA2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.83■□□□□ 0.28
HMCN2Q8NDA2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.82■□□□□ 0.28
HMCN2Q8NDA2 AL391121.1-201ENST00000607967 1349 ntBASIC16.8■□□□□ 0.28
HMCN2Q8NDA2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMCN2Q8NDA2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC16.78■□□□□ 0.28
HMCN2Q8NDA2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HMCN2Q8NDA2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMCN2Q8NDA2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMCN2Q8NDA2 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.74■□□□□ 0.27
HMCN2Q8NDA2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.74■□□□□ 0.27
HMCN2Q8NDA2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HMCN2Q8NDA2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMCN2Q8NDA2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMCN2Q8NDA2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.7■□□□□ 0.26
HMCN2Q8NDA2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMCN2Q8NDA2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.69■□□□□ 0.26
HMCN2Q8NDA2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.69■□□□□ 0.26
HMCN2Q8NDA2 MIR3665-201ENST00000578708 105 ntBASIC16.69■□□□□ 0.26
HMCN2Q8NDA2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.68■□□□□ 0.26
HMCN2Q8NDA2 HSD17B1P1-201ENST00000590052 955 ntBASIC16.68■□□□□ 0.26
HMCN2Q8NDA2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.67■□□□□ 0.26
HMCN2Q8NDA2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMCN2Q8NDA2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.65■□□□□ 0.26
HMCN2Q8NDA2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMCN2Q8NDA2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.65■□□□□ 0.26
HMCN2Q8NDA2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMCN2Q8NDA2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMCN2Q8NDA2 AC087741.3-201ENST00000624270 1347 ntBASIC16.64■□□□□ 0.26
HMCN2Q8NDA2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC16.64■□□□□ 0.26
HMCN2Q8NDA2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HMCN2Q8NDA2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.64■□□□□ 0.26
HMCN2Q8NDA2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.64■□□□□ 0.25
HMCN2Q8NDA2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMCN2Q8NDA2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMCN2Q8NDA2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms