Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL27A1Q8IZC6 AL031258.1-201ENST00000623562 325 ntBASIC28.26■■■□□ 2.11
COL27A1Q8IZC6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL27A1Q8IZC6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
COL27A1Q8IZC6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.2■■■□□ 2.1
COL27A1Q8IZC6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.12■■■□□ 2.09
COL27A1Q8IZC6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.12■■■□□ 2.09
COL27A1Q8IZC6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.12■■■□□ 2.09
COL27A1Q8IZC6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL27A1Q8IZC6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
COL27A1Q8IZC6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.07■■■□□ 2.08
COL27A1Q8IZC6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL27A1Q8IZC6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
COL27A1Q8IZC6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.01■■■□□ 2.07
COL27A1Q8IZC6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
COL27A1Q8IZC6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
COL27A1Q8IZC6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
COL27A1Q8IZC6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.96■■■□□ 2.07
COL27A1Q8IZC6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL27A1Q8IZC6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL27A1Q8IZC6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.92■■■□□ 2.06
COL27A1Q8IZC6 RARRES2P7-201ENST00000567349 469 ntBASIC27.92■■■□□ 2.06
COL27A1Q8IZC6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.92■■■□□ 2.06
COL27A1Q8IZC6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL27A1Q8IZC6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
COL27A1Q8IZC6 AC136428.2-201ENST00000563187 214 ntBASIC27.85■■■□□ 2.05
COL27A1Q8IZC6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.84■■■□□ 2.05
COL27A1Q8IZC6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.8■■■□□ 2.04
COL27A1Q8IZC6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
COL27A1Q8IZC6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
COL27A1Q8IZC6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.76■■■□□ 2.04
COL27A1Q8IZC6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL27A1Q8IZC6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.74■■■□□ 2.03
COL27A1Q8IZC6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.72■■■□□ 2.03
COL27A1Q8IZC6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL27A1Q8IZC6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL27A1Q8IZC6 SUZ12P1-203ENST00000578195 985 ntBASIC27.68■■■□□ 2.02
COL27A1Q8IZC6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL27A1Q8IZC6 SETD8P1-201ENST00000623146 1180 ntBASIC27.66■■■□□ 2.02
COL27A1Q8IZC6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL27A1Q8IZC6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.66■■■□□ 2.02
COL27A1Q8IZC6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.65■■■□□ 2.02
COL27A1Q8IZC6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL27A1Q8IZC6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.62■■■□□ 2.01
COL27A1Q8IZC6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL27A1Q8IZC6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.61■■■□□ 2.01
COL27A1Q8IZC6 AC097358.2-201ENST00000607541 1159 ntBASIC27.61■■■□□ 2.01
COL27A1Q8IZC6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.61■■■□□ 2.01
COL27A1Q8IZC6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL27A1Q8IZC6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL27A1Q8IZC6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.56■■■□□ 2
COL27A1Q8IZC6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL27A1Q8IZC6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.56■■■□□ 2
COL27A1Q8IZC6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL27A1Q8IZC6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.51■■□□□ 1.99
COL27A1Q8IZC6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
COL27A1Q8IZC6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.51■■□□□ 1.99
COL27A1Q8IZC6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.5■■□□□ 1.99
COL27A1Q8IZC6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.49■■□□□ 1.99
COL27A1Q8IZC6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.49■■□□□ 1.99
COL27A1Q8IZC6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL27A1Q8IZC6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL27A1Q8IZC6 AC145285.7-201ENST00000614819 1539 ntBASIC27.45■■□□□ 1.99
COL27A1Q8IZC6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.44■■□□□ 1.98
COL27A1Q8IZC6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
COL27A1Q8IZC6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL27A1Q8IZC6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
COL27A1Q8IZC6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL27A1Q8IZC6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.36■■□□□ 1.97
COL27A1Q8IZC6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL27A1Q8IZC6 RPS2P35-201ENST00000443417 897 ntBASIC27.35■■□□□ 1.97
COL27A1Q8IZC6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.3■■□□□ 1.96
COL27A1Q8IZC6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL27A1Q8IZC6 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.26■■□□□ 1.95
COL27A1Q8IZC6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
COL27A1Q8IZC6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.22■■□□□ 1.95
COL27A1Q8IZC6 AL162393.1-201ENST00000437852 946 ntBASIC27.21■■□□□ 1.95
COL27A1Q8IZC6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
COL27A1Q8IZC6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL27A1Q8IZC6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL27A1Q8IZC6 CAHM-201ENST00000604200 896 ntBASIC27.19■■□□□ 1.94
COL27A1Q8IZC6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL27A1Q8IZC6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL27A1Q8IZC6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL27A1Q8IZC6 AL133380.1-201ENST00000506013 324 ntBASIC27.15■■□□□ 1.94
COL27A1Q8IZC6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL27A1Q8IZC6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL27A1Q8IZC6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
COL27A1Q8IZC6 AL391121.1-201ENST00000607967 1349 ntBASIC27.12■■□□□ 1.93
COL27A1Q8IZC6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
COL27A1Q8IZC6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL27A1Q8IZC6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL27A1Q8IZC6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.1■■□□□ 1.93
COL27A1Q8IZC6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.09■■□□□ 1.93
COL27A1Q8IZC6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.09■■□□□ 1.93
COL27A1Q8IZC6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
COL27A1Q8IZC6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL27A1Q8IZC6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL27A1Q8IZC6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL27A1Q8IZC6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms