Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RAI1Q7Z5J4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RAI1Q7Z5J4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RAI1Q7Z5J4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RAI1Q7Z5J4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.08■■□□□ 1.61
RAI1Q7Z5J4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.08■■□□□ 1.61
RAI1Q7Z5J4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RAI1Q7Z5J4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
RAI1Q7Z5J4 AL031258.1-201ENST00000623562 325 ntBASIC25.05■■□□□ 1.6
RAI1Q7Z5J4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RAI1Q7Z5J4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RAI1Q7Z5J4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.01■■□□□ 1.59
RAI1Q7Z5J4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25■■□□□ 1.59
RAI1Q7Z5J4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.96■■□□□ 1.59
RAI1Q7Z5J4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.96■■□□□ 1.59
RAI1Q7Z5J4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RAI1Q7Z5J4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.91■■□□□ 1.58
RAI1Q7Z5J4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RAI1Q7Z5J4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAI1Q7Z5J4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAI1Q7Z5J4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
RAI1Q7Z5J4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.83■■□□□ 1.56
RAI1Q7Z5J4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RAI1Q7Z5J4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RAI1Q7Z5J4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.8■■□□□ 1.56
RAI1Q7Z5J4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
RAI1Q7Z5J4 RARRES2P7-201ENST00000567349 469 ntBASIC24.8■■□□□ 1.56
RAI1Q7Z5J4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.78■■□□□ 1.56
RAI1Q7Z5J4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
RAI1Q7Z5J4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAI1Q7Z5J4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
RAI1Q7Z5J4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.75■■□□□ 1.55
RAI1Q7Z5J4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RAI1Q7Z5J4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.74■■□□□ 1.55
RAI1Q7Z5J4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RAI1Q7Z5J4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RAI1Q7Z5J4 AC136428.2-201ENST00000563187 214 ntBASIC24.68■■□□□ 1.54
RAI1Q7Z5J4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAI1Q7Z5J4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RAI1Q7Z5J4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.67■■□□□ 1.54
RAI1Q7Z5J4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.66■■□□□ 1.54
RAI1Q7Z5J4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAI1Q7Z5J4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAI1Q7Z5J4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.62■■□□□ 1.53
RAI1Q7Z5J4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
RAI1Q7Z5J4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.59■■□□□ 1.53
RAI1Q7Z5J4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.58■■□□□ 1.53
RAI1Q7Z5J4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.58■■□□□ 1.53
RAI1Q7Z5J4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
RAI1Q7Z5J4 SETD8P1-201ENST00000623146 1180 ntBASIC24.56■■□□□ 1.52
RAI1Q7Z5J4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.56■■□□□ 1.52
RAI1Q7Z5J4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.56■■□□□ 1.52
RAI1Q7Z5J4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAI1Q7Z5J4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAI1Q7Z5J4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.54■■□□□ 1.52
RAI1Q7Z5J4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAI1Q7Z5J4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.51■■□□□ 1.51
RAI1Q7Z5J4 SUZ12P1-203ENST00000578195 985 ntBASIC24.51■■□□□ 1.51
RAI1Q7Z5J4 AC097358.2-201ENST00000607541 1159 ntBASIC24.51■■□□□ 1.51
RAI1Q7Z5J4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.49■■□□□ 1.51
RAI1Q7Z5J4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAI1Q7Z5J4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.49■■□□□ 1.51
RAI1Q7Z5J4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAI1Q7Z5J4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAI1Q7Z5J4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RAI1Q7Z5J4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RAI1Q7Z5J4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAI1Q7Z5J4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.45■■□□□ 1.5
RAI1Q7Z5J4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RAI1Q7Z5J4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.43■■□□□ 1.5
RAI1Q7Z5J4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.43■■□□□ 1.5
RAI1Q7Z5J4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RAI1Q7Z5J4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.39■■□□□ 1.5
RAI1Q7Z5J4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.39■■□□□ 1.5
RAI1Q7Z5J4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAI1Q7Z5J4 AC145285.7-201ENST00000614819 1539 ntBASIC24.38■■□□□ 1.49
RAI1Q7Z5J4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAI1Q7Z5J4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.37■■□□□ 1.49
RAI1Q7Z5J4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAI1Q7Z5J4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.34■■□□□ 1.49
RAI1Q7Z5J4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.34■■□□□ 1.49
RAI1Q7Z5J4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAI1Q7Z5J4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAI1Q7Z5J4 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.3■■□□□ 1.48
RAI1Q7Z5J4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.29■■□□□ 1.48
RAI1Q7Z5J4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RAI1Q7Z5J4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RAI1Q7Z5J4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
RAI1Q7Z5J4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.26■■□□□ 1.47
RAI1Q7Z5J4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
RAI1Q7Z5J4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RAI1Q7Z5J4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAI1Q7Z5J4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
RAI1Q7Z5J4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.22■■□□□ 1.47
RAI1Q7Z5J4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAI1Q7Z5J4 RPS2P35-201ENST00000443417 897 ntBASIC24.22■■□□□ 1.47
RAI1Q7Z5J4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RAI1Q7Z5J4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAI1Q7Z5J4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RAI1Q7Z5J4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms