Protein–RNA interactions for Protein: Q4G0N8

SLC9C1, Sodium/hydrogen exchanger 10, humanhuman

Predictions only

Length 1,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9C1Q4G0N8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
SLC9C1Q4G0N8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC34.08■■■■□ 3.05
SLC9C1Q4G0N8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC34.08■■■■□ 3.05
SLC9C1Q4G0N8 AL031258.1-201ENST00000623562 325 ntBASIC34.08■■■■□ 3.05
SLC9C1Q4G0N8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC34.07■■■■□ 3.04
SLC9C1Q4G0N8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.07■■■■□ 3.04
SLC9C1Q4G0N8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC34.04■■■■□ 3.04
SLC9C1Q4G0N8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.98■■■■□ 3.03
SLC9C1Q4G0N8 RARRES2P7-201ENST00000567349 469 ntBASIC33.95■■■■□ 3.03
SLC9C1Q4G0N8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC33.94■■■■□ 3.02
SLC9C1Q4G0N8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
SLC9C1Q4G0N8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.9■■■■□ 3.02
SLC9C1Q4G0N8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.89■■■■□ 3.02
SLC9C1Q4G0N8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
SLC9C1Q4G0N8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
SLC9C1Q4G0N8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
SLC9C1Q4G0N8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
SLC9C1Q4G0N8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
SLC9C1Q4G0N8 AC097358.2-201ENST00000607541 1159 ntBASIC33.73■■■□□ 2.99
SLC9C1Q4G0N8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.72■■■□□ 2.99
SLC9C1Q4G0N8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.7■■■□□ 2.99
SLC9C1Q4G0N8 RPS2P35-201ENST00000443417 897 ntBASIC33.7■■■□□ 2.99
SLC9C1Q4G0N8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.6■■■□□ 2.97
SLC9C1Q4G0N8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.59■■■□□ 2.97
SLC9C1Q4G0N8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.96
SLC9C1Q4G0N8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
SLC9C1Q4G0N8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
SLC9C1Q4G0N8 AC136428.2-201ENST00000563187 214 ntBASIC33.56■■■□□ 2.96
SLC9C1Q4G0N8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.52■■■□□ 2.96
SLC9C1Q4G0N8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.51■■■□□ 2.95
SLC9C1Q4G0N8 SUZ12P1-203ENST00000578195 985 ntBASIC33.51■■■□□ 2.95
SLC9C1Q4G0N8 SETD8P1-201ENST00000623146 1180 ntBASIC33.51■■■□□ 2.95
SLC9C1Q4G0N8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
SLC9C1Q4G0N8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
SLC9C1Q4G0N8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.43■■■□□ 2.94
SLC9C1Q4G0N8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
SLC9C1Q4G0N8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
SLC9C1Q4G0N8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.4■■■□□ 2.94
SLC9C1Q4G0N8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
SLC9C1Q4G0N8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
SLC9C1Q4G0N8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
SLC9C1Q4G0N8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
SLC9C1Q4G0N8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC33.34■■■□□ 2.93
SLC9C1Q4G0N8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC33.29■■■□□ 2.92
SLC9C1Q4G0N8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
SLC9C1Q4G0N8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SLC9C1Q4G0N8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
SLC9C1Q4G0N8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
SLC9C1Q4G0N8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.27■■■□□ 2.92
SLC9C1Q4G0N8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC33.27■■■□□ 2.92
SLC9C1Q4G0N8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC33.25■■■□□ 2.91
SLC9C1Q4G0N8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.23■■■□□ 2.91
SLC9C1Q4G0N8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC33.21■■■□□ 2.91
SLC9C1Q4G0N8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC33.2■■■□□ 2.91
SLC9C1Q4G0N8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SLC9C1Q4G0N8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC33.18■■■□□ 2.9
SLC9C1Q4G0N8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SLC9C1Q4G0N8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
SLC9C1Q4G0N8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC33.15■■■□□ 2.9
SLC9C1Q4G0N8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.13■■■□□ 2.89
SLC9C1Q4G0N8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.11■■■□□ 2.89
SLC9C1Q4G0N8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
SLC9C1Q4G0N8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.07■■■□□ 2.89
SLC9C1Q4G0N8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.05■■■□□ 2.88
SLC9C1Q4G0N8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.05■■■□□ 2.88
SLC9C1Q4G0N8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SLC9C1Q4G0N8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.01■■■□□ 2.87
SLC9C1Q4G0N8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33■■■□□ 2.87
SLC9C1Q4G0N8 AL162393.1-201ENST00000437852 946 ntBASIC32.99■■■□□ 2.87
SLC9C1Q4G0N8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.99■■■□□ 2.87
SLC9C1Q4G0N8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
SLC9C1Q4G0N8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
SLC9C1Q4G0N8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SLC9C1Q4G0N8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
SLC9C1Q4G0N8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.96■■■□□ 2.87
SLC9C1Q4G0N8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.94■■■□□ 2.86
SLC9C1Q4G0N8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.94■■■□□ 2.86
SLC9C1Q4G0N8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.93■■■□□ 2.86
SLC9C1Q4G0N8 AP006261.1-201ENST00000584783 668 ntBASIC32.88■■■□□ 2.85
SLC9C1Q4G0N8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.86■■■□□ 2.85
SLC9C1Q4G0N8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SLC9C1Q4G0N8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
SLC9C1Q4G0N8 CAHM-201ENST00000604200 896 ntBASIC32.81■■■□□ 2.84
SLC9C1Q4G0N8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SLC9C1Q4G0N8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
SLC9C1Q4G0N8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SLC9C1Q4G0N8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SLC9C1Q4G0N8 MIR7108-201ENST00000614319 87 ntBASIC32.77■■■□□ 2.84
SLC9C1Q4G0N8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.73■■■□□ 2.83
SLC9C1Q4G0N8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SLC9C1Q4G0N8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SLC9C1Q4G0N8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.68■■■□□ 2.82
SLC9C1Q4G0N8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SLC9C1Q4G0N8 ABHD17AP4-201ENST00000411545 909 ntBASIC32.67■■■□□ 2.82
SLC9C1Q4G0N8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.67■■■□□ 2.82
SLC9C1Q4G0N8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
SLC9C1Q4G0N8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SLC9C1Q4G0N8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SLC9C1Q4G0N8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.61■■■□□ 2.81
SLC9C1Q4G0N8 AL391121.1-201ENST00000607967 1349 ntBASIC32.61■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms