Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.68■■■□□ 2.98
COL11A1P12107 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.68■■■□□ 2.98
COL11A1P12107 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
COL11A1P12107 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
COL11A1P12107 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
COL11A1P12107 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.63■■■□□ 2.97
COL11A1P12107 AL031258.1-201ENST00000623562 325 ntBASIC33.62■■■□□ 2.97
COL11A1P12107 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
COL11A1P12107 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
COL11A1P12107 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.54■■■□□ 2.96
COL11A1P12107 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.54■■■□□ 2.96
COL11A1P12107 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.52■■■□□ 2.96
COL11A1P12107 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.51■■■□□ 2.96
COL11A1P12107 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
COL11A1P12107 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.51■■■□□ 2.95
COL11A1P12107 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.5■■■□□ 2.95
COL11A1P12107 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
COL11A1P12107 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
COL11A1P12107 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.46■■■□□ 2.95
COL11A1P12107 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
COL11A1P12107 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.45■■■□□ 2.95
COL11A1P12107 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL11A1P12107 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.44■■■□□ 2.94
COL11A1P12107 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
COL11A1P12107 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.38■■■□□ 2.93
COL11A1P12107 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.37■■■□□ 2.93
COL11A1P12107 RARRES2P7-201ENST00000567349 469 ntBASIC33.29■■■□□ 2.92
COL11A1P12107 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
COL11A1P12107 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.25■■■□□ 2.91
COL11A1P12107 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.23■■■□□ 2.91
COL11A1P12107 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC33.23■■■□□ 2.91
COL11A1P12107 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.21■■■□□ 2.91
COL11A1P12107 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.21■■■□□ 2.91
COL11A1P12107 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
COL11A1P12107 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
COL11A1P12107 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC33.18■■■□□ 2.9
COL11A1P12107 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9
COL11A1P12107 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
COL11A1P12107 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
COL11A1P12107 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.13■■■□□ 2.89
COL11A1P12107 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.09■■■□□ 2.89
COL11A1P12107 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
COL11A1P12107 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC33.07■■■□□ 2.88
COL11A1P12107 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
COL11A1P12107 AC136428.2-201ENST00000563187 214 ntBASIC33.06■■■□□ 2.88
COL11A1P12107 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC33.05■■■□□ 2.88
COL11A1P12107 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC33.05■■■□□ 2.88
COL11A1P12107 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.04■■■□□ 2.88
COL11A1P12107 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33■■■□□ 2.87
COL11A1P12107 AC145285.7-201ENST00000614819 1539 ntBASIC32.99■■■□□ 2.87
COL11A1P12107 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
COL11A1P12107 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.96■■■□□ 2.87
COL11A1P12107 SETD8P1-201ENST00000623146 1180 ntBASIC32.95■■■□□ 2.86
COL11A1P12107 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.89■■■□□ 2.86
COL11A1P12107 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
COL11A1P12107 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL11A1P12107 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL11A1P12107 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
COL11A1P12107 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.84■■■□□ 2.85
COL11A1P12107 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.84■■■□□ 2.85
COL11A1P12107 AC097358.2-201ENST00000607541 1159 ntBASIC32.84■■■□□ 2.85
COL11A1P12107 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.82■■■□□ 2.84
COL11A1P12107 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.82■■■□□ 2.84
COL11A1P12107 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.82■■■□□ 2.84
COL11A1P12107 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
COL11A1P12107 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
COL11A1P12107 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.81■■■□□ 2.84
COL11A1P12107 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.8■■■□□ 2.84
COL11A1P12107 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.79■■■□□ 2.84
COL11A1P12107 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.79■■■□□ 2.84
COL11A1P12107 SUZ12P1-203ENST00000578195 985 ntBASIC32.79■■■□□ 2.84
COL11A1P12107 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.79■■■□□ 2.84
COL11A1P12107 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
COL11A1P12107 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.77■■■□□ 2.84
COL11A1P12107 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
COL11A1P12107 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL11A1P12107 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
COL11A1P12107 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
COL11A1P12107 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
COL11A1P12107 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.63■■■□□ 2.81
COL11A1P12107 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
COL11A1P12107 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
COL11A1P12107 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
COL11A1P12107 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
COL11A1P12107 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.57■■■□□ 2.8
COL11A1P12107 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.56■■■□□ 2.8
COL11A1P12107 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
COL11A1P12107 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
COL11A1P12107 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.5■■■□□ 2.79
COL11A1P12107 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
COL11A1P12107 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.47■■■□□ 2.79
COL11A1P12107 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
COL11A1P12107 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
COL11A1P12107 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.45■■■□□ 2.79
COL11A1P12107 AL133380.1-201ENST00000506013 324 ntBASIC32.44■■■□□ 2.78
COL11A1P12107 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
COL11A1P12107 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
COL11A1P12107 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.42■■■□□ 2.78
COL11A1P12107 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
COL11A1P12107 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms