Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.69■■■□□ 2.82
CD4P01730 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CD4P01730 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
CD4P01730 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.67■■■□□ 2.82
CD4P01730 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CD4P01730 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.62■■■□□ 2.81
CD4P01730 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
CD4P01730 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.62■■■□□ 2.81
CD4P01730 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.61■■■□□ 2.81
CD4P01730 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.59■■■□□ 2.81
CD4P01730 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.59■■■□□ 2.81
CD4P01730 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CD4P01730 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.58■■■□□ 2.81
CD4P01730 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CD4P01730 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.53■■■□□ 2.8
CD4P01730 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.51■■■□□ 2.79
CD4P01730 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CD4P01730 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
CD4P01730 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.48■■■□□ 2.79
CD4P01730 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
CD4P01730 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
CD4P01730 RARRES2P7-201ENST00000567349 469 ntBASIC32.41■■■□□ 2.78
CD4P01730 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.34■■■□□ 2.77
CD4P01730 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CD4P01730 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CD4P01730 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.31■■■□□ 2.76
CD4P01730 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CD4P01730 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CD4P01730 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.21■■■□□ 2.75
CD4P01730 AC097358.2-201ENST00000607541 1159 ntBASIC32.2■■■□□ 2.75
CD4P01730 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
CD4P01730 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.18■■■□□ 2.74
CD4P01730 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.17■■■□□ 2.74
CD4P01730 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.16■■■□□ 2.74
CD4P01730 AC136428.2-201ENST00000563187 214 ntBASIC32.16■■■□□ 2.74
CD4P01730 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.13■■■□□ 2.73
CD4P01730 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CD4P01730 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CD4P01730 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CD4P01730 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
CD4P01730 SETD8P1-201ENST00000623146 1180 ntBASIC32.09■■■□□ 2.73
CD4P01730 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CD4P01730 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CD4P01730 SUZ12P1-203ENST00000578195 985 ntBASIC32.03■■■□□ 2.72
CD4P01730 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.01■■■□□ 2.71
CD4P01730 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.01■■■□□ 2.71
CD4P01730 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CD4P01730 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CD4P01730 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CD4P01730 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.95■■■□□ 2.71
CD4P01730 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.94■■■□□ 2.7
CD4P01730 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.93■■■□□ 2.7
CD4P01730 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CD4P01730 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CD4P01730 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CD4P01730 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.9■■■□□ 2.7
CD4P01730 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CD4P01730 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.89■■■□□ 2.7
CD4P01730 RPS2P35-201ENST00000443417 897 ntBASIC31.88■■■□□ 2.69
CD4P01730 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
CD4P01730 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CD4P01730 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.81■■■□□ 2.68
CD4P01730 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CD4P01730 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CD4P01730 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.77■■■□□ 2.68
CD4P01730 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.77■■■□□ 2.68
CD4P01730 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CD4P01730 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
CD4P01730 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.75■■■□□ 2.67
CD4P01730 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CD4P01730 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CD4P01730 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CD4P01730 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
CD4P01730 CAHM-201ENST00000604200 896 ntBASIC31.6■■■□□ 2.65
CD4P01730 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.59■■■□□ 2.65
CD4P01730 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
CD4P01730 AC145285.7-201ENST00000614819 1539 ntBASIC31.58■■■□□ 2.65
CD4P01730 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.57■■■□□ 2.64
CD4P01730 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CD4P01730 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CD4P01730 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CD4P01730 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CD4P01730 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CD4P01730 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CD4P01730 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CD4P01730 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.47■■■□□ 2.63
CD4P01730 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.46■■■□□ 2.63
CD4P01730 AL162393.1-201ENST00000437852 946 ntBASIC31.46■■■□□ 2.63
CD4P01730 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CD4P01730 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CD4P01730 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CD4P01730 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.44■■■□□ 2.62
CD4P01730 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.41■■■□□ 2.62
CD4P01730 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.41■■■□□ 2.62
CD4P01730 AL391121.1-201ENST00000607967 1349 ntBASIC31.41■■■□□ 2.62
CD4P01730 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CD4P01730 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CD4P01730 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
CD4P01730 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
CD4P01730 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms