Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.86■■■□□ 2.37
RPP40O75818 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
RPP40O75818 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
RPP40O75818 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RPP40O75818 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RPP40O75818 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RPP40O75818 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.81■■■□□ 2.36
RPP40O75818 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RPP40O75818 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RPP40O75818 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RPP40O75818 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.76■■■□□ 2.35
RPP40O75818 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RPP40O75818 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
RPP40O75818 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.71■■■□□ 2.35
RPP40O75818 AL031258.1-201ENST00000623562 325 ntBASIC29.69■■■□□ 2.34
RPP40O75818 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RPP40O75818 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.62■■■□□ 2.33
RPP40O75818 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RPP40O75818 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.61■■■□□ 2.33
RPP40O75818 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.61■■■□□ 2.33
RPP40O75818 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RPP40O75818 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
RPP40O75818 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.57■■■□□ 2.32
RPP40O75818 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RPP40O75818 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.56■■■□□ 2.32
RPP40O75818 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RPP40O75818 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RPP40O75818 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
RPP40O75818 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.52■■■□□ 2.32
RPP40O75818 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RPP40O75818 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
RPP40O75818 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.51■■■□□ 2.31
RPP40O75818 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
RPP40O75818 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RPP40O75818 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.48■■■□□ 2.31
RPP40O75818 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.47■■■□□ 2.31
RPP40O75818 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.46■■■□□ 2.31
RPP40O75818 RARRES2P7-201ENST00000567349 469 ntBASIC29.44■■■□□ 2.3
RPP40O75818 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
RPP40O75818 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
RPP40O75818 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.39■■■□□ 2.3
RPP40O75818 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RPP40O75818 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RPP40O75818 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.35■■■□□ 2.29
RPP40O75818 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RPP40O75818 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
RPP40O75818 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RPP40O75818 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
RPP40O75818 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RPP40O75818 AC097358.2-201ENST00000607541 1159 ntBASIC29.22■■■□□ 2.27
RPP40O75818 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RPP40O75818 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.18■■■□□ 2.26
RPP40O75818 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.18■■■□□ 2.26
RPP40O75818 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RPP40O75818 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.16■■■□□ 2.26
RPP40O75818 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
RPP40O75818 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
RPP40O75818 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RPP40O75818 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RPP40O75818 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.11■■■□□ 2.25
RPP40O75818 AC145285.7-201ENST00000614819 1539 ntBASIC29.1■■■□□ 2.25
RPP40O75818 SETD8P1-201ENST00000623146 1180 ntBASIC29.1■■■□□ 2.25
RPP40O75818 AC136428.2-201ENST00000563187 214 ntBASIC29.08■■■□□ 2.25
RPP40O75818 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.08■■■□□ 2.25
RPP40O75818 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RPP40O75818 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.04■■■□□ 2.24
RPP40O75818 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RPP40O75818 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.01■■■□□ 2.23
RPP40O75818 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
RPP40O75818 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RPP40O75818 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
RPP40O75818 SUZ12P1-203ENST00000578195 985 ntBASIC28.98■■■□□ 2.23
RPP40O75818 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RPP40O75818 RPS2P35-201ENST00000443417 897 ntBASIC28.97■■■□□ 2.23
RPP40O75818 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.97■■■□□ 2.23
RPP40O75818 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RPP40O75818 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.94■■■□□ 2.22
RPP40O75818 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
RPP40O75818 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.91■■■□□ 2.22
RPP40O75818 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.91■■■□□ 2.22
RPP40O75818 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RPP40O75818 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RPP40O75818 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RPP40O75818 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RPP40O75818 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.87■■■□□ 2.21
RPP40O75818 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RPP40O75818 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
RPP40O75818 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
RPP40O75818 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RPP40O75818 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.81■■■□□ 2.2
RPP40O75818 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RPP40O75818 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.8■■■□□ 2.2
RPP40O75818 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.79■■■□□ 2.2
RPP40O75818 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.79■■■□□ 2.2
RPP40O75818 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RPP40O75818 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
RPP40O75818 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
RPP40O75818 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RPP40O75818 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
RPP40O75818 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms