Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC33.71■■■□□ 2.99
TNRC18O15417 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
TNRC18O15417 AL031258.1-201ENST00000623562 325 ntBASIC33.66■■■□□ 2.98
TNRC18O15417 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC33.59■■■□□ 2.97
TNRC18O15417 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
TNRC18O15417 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
TNRC18O15417 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC33.55■■■□□ 2.96
TNRC18O15417 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
TNRC18O15417 AL162393.1-201ENST00000437852 946 ntBASIC33.53■■■□□ 2.96
TNRC18O15417 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC33.52■■■□□ 2.96
TNRC18O15417 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC33.48■■■□□ 2.95
TNRC18O15417 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.48■■■□□ 2.95
TNRC18O15417 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
TNRC18O15417 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
TNRC18O15417 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC33.48■■■□□ 2.95
TNRC18O15417 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC33.46■■■□□ 2.95
TNRC18O15417 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.45■■■□□ 2.95
TNRC18O15417 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
TNRC18O15417 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
TNRC18O15417 HLA-V-202ENST00000446817 847 ntBASIC33.4■■■□□ 2.94
TNRC18O15417 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.38■■■□□ 2.93
TNRC18O15417 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
TNRC18O15417 SETD8P1-201ENST00000623146 1180 ntBASIC33.34■■■□□ 2.93
TNRC18O15417 MIR7108-201ENST00000614319 87 ntBASIC33.34■■■□□ 2.93
TNRC18O15417 NRG1-221ENST00000614767 762 ntTSL 5 BASIC33.32■■■□□ 2.92
TNRC18O15417 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.32■■■□□ 2.92
TNRC18O15417 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
TNRC18O15417 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
TNRC18O15417 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.25■■■□□ 2.91
TNRC18O15417 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC33.25■■■□□ 2.91
TNRC18O15417 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
TNRC18O15417 PVT1-219ENST00000523427 938 ntTSL 3 BASIC33.21■■■□□ 2.91
TNRC18O15417 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
TNRC18O15417 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
TNRC18O15417 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
TNRC18O15417 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC33.12■■■□□ 2.89
TNRC18O15417 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.12■■■□□ 2.89
TNRC18O15417 MBP-237ENST00000579129 1052 ntTSL 5 BASIC33.11■■■□□ 2.89
TNRC18O15417 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
TNRC18O15417 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.09■■■□□ 2.89
TNRC18O15417 ABHD17AP4-201ENST00000411545 909 ntBASIC33.07■■■□□ 2.88
TNRC18O15417 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
TNRC18O15417 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
TNRC18O15417 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
TNRC18O15417 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
TNRC18O15417 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
TNRC18O15417 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
TNRC18O15417 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
TNRC18O15417 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
TNRC18O15417 AP006261.1-201ENST00000584783 668 ntBASIC32.85■■■□□ 2.85
TNRC18O15417 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.84■■■□□ 2.85
TNRC18O15417 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.83■■■□□ 2.85
TNRC18O15417 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
TNRC18O15417 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.81■■■□□ 2.84
TNRC18O15417 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.8■■■□□ 2.84
TNRC18O15417 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.79■■■□□ 2.84
TNRC18O15417 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.78■■■□□ 2.84
TNRC18O15417 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
TNRC18O15417 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.75■■■□□ 2.83
TNRC18O15417 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
TNRC18O15417 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.73■■■□□ 2.83
TNRC18O15417 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.73■■■□□ 2.83
TNRC18O15417 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
TNRC18O15417 CAHM-201ENST00000604200 896 ntBASIC32.68■■■□□ 2.82
TNRC18O15417 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
TNRC18O15417 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
TNRC18O15417 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
TNRC18O15417 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
TNRC18O15417 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.64■■■□□ 2.82
TNRC18O15417 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.63■■■□□ 2.81
TNRC18O15417 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.63■■■□□ 2.81
TNRC18O15417 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.63■■■□□ 2.81
TNRC18O15417 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.61■■■□□ 2.81
TNRC18O15417 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.61■■■□□ 2.81
TNRC18O15417 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
TNRC18O15417 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
TNRC18O15417 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.58■■■□□ 2.81
TNRC18O15417 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TNRC18O15417 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
TNRC18O15417 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
TNRC18O15417 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.57■■■□□ 2.8
TNRC18O15417 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
TNRC18O15417 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.52■■■□□ 2.8
TNRC18O15417 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
TNRC18O15417 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.51■■■□□ 2.79
TNRC18O15417 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TNRC18O15417 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.46■■■□□ 2.79
TNRC18O15417 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.45■■■□□ 2.79
TNRC18O15417 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.45■■■□□ 2.78
TNRC18O15417 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
TNRC18O15417 AL391121.1-201ENST00000607967 1349 ntBASIC32.42■■■□□ 2.78
TNRC18O15417 AC087741.3-201ENST00000624270 1347 ntBASIC32.4■■■□□ 2.78
TNRC18O15417 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
TNRC18O15417 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.39■■■□□ 2.78
TNRC18O15417 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.39■■■□□ 2.78
TNRC18O15417 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
TNRC18O15417 MIR4449-201ENST00000578365 66 ntBASIC32.36■■■□□ 2.77
TNRC18O15417 MIR3665-201ENST00000578708 105 ntBASIC32.35■■■□□ 2.77
TNRC18O15417 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
TNRC18O15417 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 913.7 ms