Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SOX1O00570 AC097358.2-201ENST00000607541 1159 ntBASIC32.63■■■□□ 2.81
SOX1O00570 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.6■■■□□ 2.81
SOX1O00570 SUZ12P1-203ENST00000578195 985 ntBASIC32.57■■■□□ 2.8
SOX1O00570 AC136428.2-201ENST00000563187 214 ntBASIC32.52■■■□□ 2.8
SOX1O00570 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
SOX1O00570 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SOX1O00570 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
SOX1O00570 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SOX1O00570 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
SOX1O00570 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SOX1O00570 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SOX1O00570 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SOX1O00570 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.33■■■□□ 2.77
SOX1O00570 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SOX1O00570 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.3■■■□□ 2.76
SOX1O00570 SETD8P1-201ENST00000623146 1180 ntBASIC32.29■■■□□ 2.76
SOX1O00570 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SOX1O00570 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.27■■■□□ 2.76
SOX1O00570 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
SOX1O00570 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SOX1O00570 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SOX1O00570 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SOX1O00570 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SOX1O00570 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.19■■■□□ 2.74
SOX1O00570 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.11■■■□□ 2.73
SOX1O00570 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
SOX1O00570 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.09■■■□□ 2.73
SOX1O00570 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.08■■■□□ 2.73
SOX1O00570 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.07■■■□□ 2.72
SOX1O00570 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SOX1O00570 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SOX1O00570 AL162393.1-201ENST00000437852 946 ntBASIC32.03■■■□□ 2.72
SOX1O00570 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
SOX1O00570 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SOX1O00570 MIR7108-201ENST00000614319 87 ntBASIC32■■■□□ 2.71
SOX1O00570 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SOX1O00570 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SOX1O00570 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.97■■■□□ 2.71
SOX1O00570 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.96■■■□□ 2.71
SOX1O00570 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.71
SOX1O00570 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SOX1O00570 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.93■■■□□ 2.7
SOX1O00570 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.92■■■□□ 2.7
SOX1O00570 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
SOX1O00570 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
SOX1O00570 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.87■■■□□ 2.69
SOX1O00570 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SOX1O00570 ABHD17AP4-201ENST00000411545 909 ntBASIC31.84■■■□□ 2.69
SOX1O00570 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.84■■■□□ 2.69
SOX1O00570 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.8■■■□□ 2.68
SOX1O00570 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SOX1O00570 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.79■■■□□ 2.68
SOX1O00570 HLA-V-202ENST00000446817 847 ntBASIC31.75■■■□□ 2.67
SOX1O00570 AP006261.1-201ENST00000584783 668 ntBASIC31.73■■■□□ 2.67
SOX1O00570 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SOX1O00570 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.71■■■□□ 2.67
SOX1O00570 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.7■■■□□ 2.67
SOX1O00570 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
SOX1O00570 CAHM-201ENST00000604200 896 ntBASIC31.69■■■□□ 2.66
SOX1O00570 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SOX1O00570 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SOX1O00570 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.64■■■□□ 2.66
SOX1O00570 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SOX1O00570 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SOX1O00570 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SOX1O00570 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
SOX1O00570 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SOX1O00570 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SOX1O00570 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SOX1O00570 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SOX1O00570 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.53■■■□□ 2.64
SOX1O00570 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SOX1O00570 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.46■■■□□ 2.63
SOX1O00570 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.46■■■□□ 2.63
SOX1O00570 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.46■■■□□ 2.63
SOX1O00570 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SOX1O00570 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SOX1O00570 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.43■■■□□ 2.62
SOX1O00570 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.42■■■□□ 2.62
SOX1O00570 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.42■■■□□ 2.62
SOX1O00570 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SOX1O00570 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SOX1O00570 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SOX1O00570 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SOX1O00570 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.38■■■□□ 2.61
SOX1O00570 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SOX1O00570 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.36■■■□□ 2.61
SOX1O00570 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
SOX1O00570 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.35■■■□□ 2.61
SOX1O00570 AL391121.1-201ENST00000607967 1349 ntBASIC31.35■■■□□ 2.61
SOX1O00570 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
SOX1O00570 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SOX1O00570 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.28■■■□□ 2.6
SOX1O00570 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.24■■■□□ 2.59
SOX1O00570 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.23■■■□□ 2.59
SOX1O00570 MIR3665-201ENST00000578708 105 ntBASIC31.23■■■□□ 2.59
SOX1O00570 AC087741.3-201ENST00000624270 1347 ntBASIC31.23■■■□□ 2.59
SOX1O00570 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.22■■■□□ 2.59
SOX1O00570 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms