Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.51■■□□□ 1.83
SH3D21A4FU49 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH3D21A4FU49 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SH3D21A4FU49 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH3D21A4FU49 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH3D21A4FU49 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SH3D21A4FU49 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.45■■□□□ 1.83
SH3D21A4FU49 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SH3D21A4FU49 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SH3D21A4FU49 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.42■■□□□ 1.82
SH3D21A4FU49 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3D21A4FU49 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH3D21A4FU49 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.41■■□□□ 1.82
SH3D21A4FU49 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.41■■□□□ 1.82
SH3D21A4FU49 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SH3D21A4FU49 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH3D21A4FU49 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH3D21A4FU49 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SH3D21A4FU49 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH3D21A4FU49 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.32■■□□□ 1.8
SH3D21A4FU49 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SH3D21A4FU49 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SH3D21A4FU49 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3D21A4FU49 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3D21A4FU49 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3D21A4FU49 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SH3D21A4FU49 AC145285.7-201ENST00000614819 1539 ntBASIC26.22■■□□□ 1.79
SH3D21A4FU49 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SH3D21A4FU49 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH3D21A4FU49 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH3D21A4FU49 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SH3D21A4FU49 AP002365.1-201ENST00000603448 772 ntBASIC26.16■■□□□ 1.78
SH3D21A4FU49 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.15■■□□□ 1.78
SH3D21A4FU49 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SH3D21A4FU49 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.13■■□□□ 1.77
SH3D21A4FU49 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SH3D21A4FU49 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SH3D21A4FU49 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3D21A4FU49 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3D21A4FU49 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3D21A4FU49 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SH3D21A4FU49 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3D21A4FU49 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.04■■□□□ 1.76
SH3D21A4FU49 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH3D21A4FU49 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH3D21A4FU49 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH3D21A4FU49 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SH3D21A4FU49 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26■■□□□ 1.75
SH3D21A4FU49 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SH3D21A4FU49 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
SH3D21A4FU49 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SH3D21A4FU49 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
SH3D21A4FU49 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
SH3D21A4FU49 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SH3D21A4FU49 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SH3D21A4FU49 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.94■■□□□ 1.74
SH3D21A4FU49 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SH3D21A4FU49 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SH3D21A4FU49 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
SH3D21A4FU49 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.93■■□□□ 1.74
SH3D21A4FU49 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SH3D21A4FU49 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.93■■□□□ 1.74
SH3D21A4FU49 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SH3D21A4FU49 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SH3D21A4FU49 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SH3D21A4FU49 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.91■■□□□ 1.74
SH3D21A4FU49 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.9■■□□□ 1.74
SH3D21A4FU49 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH3D21A4FU49 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SH3D21A4FU49 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH3D21A4FU49 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SH3D21A4FU49 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.86■■□□□ 1.73
SH3D21A4FU49 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SH3D21A4FU49 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SH3D21A4FU49 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
SH3D21A4FU49 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.85■■□□□ 1.73
SH3D21A4FU49 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SH3D21A4FU49 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.83■■□□□ 1.73
SH3D21A4FU49 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SH3D21A4FU49 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SH3D21A4FU49 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
SH3D21A4FU49 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH3D21A4FU49 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH3D21A4FU49 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SH3D21A4FU49 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SH3D21A4FU49 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SH3D21A4FU49 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.78■■□□□ 1.72
SH3D21A4FU49 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.78■■□□□ 1.72
SH3D21A4FU49 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SH3D21A4FU49 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SH3D21A4FU49 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SH3D21A4FU49 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SH3D21A4FU49 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SH3D21A4FU49 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SH3D21A4FU49 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
SH3D21A4FU49 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.71■■□□□ 1.71
SH3D21A4FU49 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SH3D21A4FU49 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SH3D21A4FU49 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.68■■□□□ 1.7
SH3D21A4FU49 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms