Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRAV8-4A0A0B4J246 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV8-4A0A0B4J246 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV8-4A0A0B4J246 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV8-4A0A0B4J246 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV8-4A0A0B4J246 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV8-4A0A0B4J246 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV8-4A0A0B4J246 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV8-4A0A0B4J246 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV8-4A0A0B4J246 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV8-4A0A0B4J246 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV8-4A0A0B4J246 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV8-4A0A0B4J246 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV8-4A0A0B4J246 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRAV8-4A0A0B4J246 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV8-4A0A0B4J246 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRAV8-4A0A0B4J246 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-4A0A0B4J246 AC015813.7-201ENST00000623294 581 ntBASIC19.75■□□□□ 0.75
TRAV8-4A0A0B4J246 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV8-4A0A0B4J246 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-4A0A0B4J246 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-4A0A0B4J246 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV8-4A0A0B4J246 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-4A0A0B4J246 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-4A0A0B4J246 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV8-4A0A0B4J246 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV8-4A0A0B4J246 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV8-4A0A0B4J246 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRAV8-4A0A0B4J246 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV8-4A0A0B4J246 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV8-4A0A0B4J246 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRAV8-4A0A0B4J246 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-4A0A0B4J246 AC145285.7-201ENST00000614819 1539 ntBASIC19.61■□□□□ 0.73
TRAV8-4A0A0B4J246 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAV8-4A0A0B4J246 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-4A0A0B4J246 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-4A0A0B4J246 AL161658.1-201ENST00000623641 1967 ntBASIC19.55■□□□□ 0.72
TRAV8-4A0A0B4J246 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV8-4A0A0B4J246 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV8-4A0A0B4J246 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV8-4A0A0B4J246 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV8-4A0A0B4J246 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-4A0A0B4J246 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-4A0A0B4J246 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-4A0A0B4J246 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV8-4A0A0B4J246 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV8-4A0A0B4J246 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAV8-4A0A0B4J246 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAV8-4A0A0B4J246 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-4A0A0B4J246 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-4A0A0B4J246 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-4A0A0B4J246 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRAV8-4A0A0B4J246 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRAV8-4A0A0B4J246 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAV8-4A0A0B4J246 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-4A0A0B4J246 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-4A0A0B4J246 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-4A0A0B4J246 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-4A0A0B4J246 AC006077.2-201ENST00000623591 457 ntBASIC19.34■□□□□ 0.69
TRAV8-4A0A0B4J246 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-4A0A0B4J246 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-4A0A0B4J246 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRAV8-4A0A0B4J246 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV8-4A0A0B4J246 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-4A0A0B4J246 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRAV8-4A0A0B4J246 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRAV8-4A0A0B4J246 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV8-4A0A0B4J246 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-4A0A0B4J246 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-4A0A0B4J246 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
TRAV8-4A0A0B4J246 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV8-4A0A0B4J246 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-4A0A0B4J246 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-4A0A0B4J246 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-4A0A0B4J246 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-4A0A0B4J246 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-4A0A0B4J246 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-4A0A0B4J246 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-4A0A0B4J246 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-4A0A0B4J246 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-4A0A0B4J246 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-4A0A0B4J246 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV8-4A0A0B4J246 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-4A0A0B4J246 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV8-4A0A0B4J246 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-4A0A0B4J246 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-4A0A0B4J246 AC139426.1-201ENST00000568218 2529 ntBASIC19.18■□□□□ 0.66
TRAV8-4A0A0B4J246 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-4A0A0B4J246 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRAV8-4A0A0B4J246 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-4A0A0B4J246 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-4A0A0B4J246 ZNRF2P1-201ENST00000441407 443 ntBASIC19.16■□□□□ 0.66
TRAV8-4A0A0B4J246 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRAV8-4A0A0B4J246 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
TRAV8-4A0A0B4J246 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-4A0A0B4J246 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-4A0A0B4J246 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV8-4A0A0B4J246 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRAV8-4A0A0B4J246 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
TRAV8-4A0A0B4J246 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms