Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV8-1A0A0A6YYK1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV8-1A0A0A6YYK1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV8-1A0A0A6YYK1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TRAV8-1A0A0A6YYK1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.84■■□□□ 1.09
TRAV8-1A0A0A6YYK1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.84■■□□□ 1.09
TRAV8-1A0A0A6YYK1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV8-1A0A0A6YYK1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV8-1A0A0A6YYK1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV8-1A0A0A6YYK1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV8-1A0A0A6YYK1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV8-1A0A0A6YYK1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TRAV8-1A0A0A6YYK1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV8-1A0A0A6YYK1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV8-1A0A0A6YYK1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
TRAV8-1A0A0A6YYK1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV8-1A0A0A6YYK1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV8-1A0A0A6YYK1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV8-1A0A0A6YYK1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV8-1A0A0A6YYK1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV8-1A0A0A6YYK1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV8-1A0A0A6YYK1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
TRAV8-1A0A0A6YYK1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV8-1A0A0A6YYK1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.67■■□□□ 1.06
TRAV8-1A0A0A6YYK1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV8-1A0A0A6YYK1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV8-1A0A0A6YYK1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV8-1A0A0A6YYK1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRAV8-1A0A0A6YYK1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.6■■□□□ 1.05
TRAV8-1A0A0A6YYK1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV8-1A0A0A6YYK1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV8-1A0A0A6YYK1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV8-1A0A0A6YYK1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TRAV8-1A0A0A6YYK1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV8-1A0A0A6YYK1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV8-1A0A0A6YYK1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV8-1A0A0A6YYK1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV8-1A0A0A6YYK1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV8-1A0A0A6YYK1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV8-1A0A0A6YYK1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV8-1A0A0A6YYK1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRAV8-1A0A0A6YYK1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV8-1A0A0A6YYK1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.51■■□□□ 1.03
TRAV8-1A0A0A6YYK1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRAV8-1A0A0A6YYK1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV8-1A0A0A6YYK1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV8-1A0A0A6YYK1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.47■■□□□ 1.03
TRAV8-1A0A0A6YYK1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV8-1A0A0A6YYK1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV8-1A0A0A6YYK1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV8-1A0A0A6YYK1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.45■■□□□ 1.02
TRAV8-1A0A0A6YYK1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV8-1A0A0A6YYK1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV8-1A0A0A6YYK1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV8-1A0A0A6YYK1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV8-1A0A0A6YYK1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV8-1A0A0A6YYK1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV8-1A0A0A6YYK1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV8-1A0A0A6YYK1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV8-1A0A0A6YYK1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV8-1A0A0A6YYK1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV8-1A0A0A6YYK1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAV8-1A0A0A6YYK1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV8-1A0A0A6YYK1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.37■■□□□ 1.01
TRAV8-1A0A0A6YYK1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-1A0A0A6YYK1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.36■■□□□ 1.01
TRAV8-1A0A0A6YYK1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV8-1A0A0A6YYK1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.35■■□□□ 1.01
TRAV8-1A0A0A6YYK1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV8-1A0A0A6YYK1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRAV8-1A0A0A6YYK1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV8-1A0A0A6YYK1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-1A0A0A6YYK1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-1A0A0A6YYK1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV8-1A0A0A6YYK1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAV8-1A0A0A6YYK1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.3■■□□□ 1
TRAV8-1A0A0A6YYK1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRAV8-1A0A0A6YYK1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV8-1A0A0A6YYK1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV8-1A0A0A6YYK1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRAV8-1A0A0A6YYK1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV8-1A0A0A6YYK1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.25■□□□□ 0.99
TRAV8-1A0A0A6YYK1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV8-1A0A0A6YYK1 AC015813.7-201ENST00000623294 581 ntBASIC21.2■□□□□ 0.98
TRAV8-1A0A0A6YYK1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAV8-1A0A0A6YYK1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV8-1A0A0A6YYK1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV8-1A0A0A6YYK1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV8-1A0A0A6YYK1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV8-1A0A0A6YYK1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV8-1A0A0A6YYK1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV8-1A0A0A6YYK1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.15■□□□□ 0.98
TRAV8-1A0A0A6YYK1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.15■□□□□ 0.98
TRAV8-1A0A0A6YYK1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV8-1A0A0A6YYK1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV8-1A0A0A6YYK1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAV8-1A0A0A6YYK1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV8-1A0A0A6YYK1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV8-1A0A0A6YYK1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAV8-1A0A0A6YYK1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms