Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC187A0A096LP49 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.03■■■□□ 2.08
CCDC187A0A096LP49 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.03■■■□□ 2.08
CCDC187A0A096LP49 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28■■■□□ 2.07
CCDC187A0A096LP49 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC187A0A096LP49 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC187A0A096LP49 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
CCDC187A0A096LP49 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.98■■■□□ 2.07
CCDC187A0A096LP49 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.98■■■□□ 2.07
CCDC187A0A096LP49 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.96■■■□□ 2.07
CCDC187A0A096LP49 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.87■■■□□ 2.05
CCDC187A0A096LP49 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CCDC187A0A096LP49 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CCDC187A0A096LP49 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
CCDC187A0A096LP49 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.83■■■□□ 2.05
CCDC187A0A096LP49 RARRES2P7-201ENST00000567349 469 ntBASIC27.82■■■□□ 2.04
CCDC187A0A096LP49 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
CCDC187A0A096LP49 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
CCDC187A0A096LP49 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.79■■■□□ 2.04
CCDC187A0A096LP49 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.79■■■□□ 2.04
CCDC187A0A096LP49 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.77■■■□□ 2.04
CCDC187A0A096LP49 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CCDC187A0A096LP49 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CCDC187A0A096LP49 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CCDC187A0A096LP49 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.69■■■□□ 2.02
CCDC187A0A096LP49 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
CCDC187A0A096LP49 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.67■■■□□ 2.02
CCDC187A0A096LP49 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.66■■■□□ 2.02
CCDC187A0A096LP49 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.66■■■□□ 2.02
CCDC187A0A096LP49 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.66■■■□□ 2.02
CCDC187A0A096LP49 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.65■■■□□ 2.02
CCDC187A0A096LP49 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
CCDC187A0A096LP49 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CCDC187A0A096LP49 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.62■■■□□ 2.01
CCDC187A0A096LP49 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
CCDC187A0A096LP49 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.59■■■□□ 2.01
CCDC187A0A096LP49 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CCDC187A0A096LP49 AC097358.2-201ENST00000607541 1159 ntBASIC27.58■■■□□ 2.01
CCDC187A0A096LP49 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC187A0A096LP49 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC187A0A096LP49 SETD8P1-201ENST00000623146 1180 ntBASIC27.54■■■□□ 2
CCDC187A0A096LP49 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.51■■□□□ 1.99
CCDC187A0A096LP49 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC187A0A096LP49 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.49■■□□□ 1.99
CCDC187A0A096LP49 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CCDC187A0A096LP49 AC136428.2-201ENST00000563187 214 ntBASIC27.46■■□□□ 1.99
CCDC187A0A096LP49 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC187A0A096LP49 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC187A0A096LP49 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.41■■□□□ 1.98
CCDC187A0A096LP49 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.38■■□□□ 1.97
CCDC187A0A096LP49 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC187A0A096LP49 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC187A0A096LP49 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC187A0A096LP49 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC187A0A096LP49 SUZ12P1-203ENST00000578195 985 ntBASIC27.34■■□□□ 1.97
CCDC187A0A096LP49 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC187A0A096LP49 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.31■■□□□ 1.96
CCDC187A0A096LP49 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC187A0A096LP49 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC187A0A096LP49 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC187A0A096LP49 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC187A0A096LP49 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC187A0A096LP49 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC187A0A096LP49 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.28■■□□□ 1.96
CCDC187A0A096LP49 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC187A0A096LP49 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.26■■□□□ 1.95
CCDC187A0A096LP49 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CCDC187A0A096LP49 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.24■■□□□ 1.95
CCDC187A0A096LP49 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC187A0A096LP49 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.21■■□□□ 1.95
CCDC187A0A096LP49 RPS2P35-201ENST00000443417 897 ntBASIC27.2■■□□□ 1.94
CCDC187A0A096LP49 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
CCDC187A0A096LP49 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC187A0A096LP49 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC187A0A096LP49 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC187A0A096LP49 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
CCDC187A0A096LP49 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC187A0A096LP49 AC145285.7-201ENST00000614819 1539 ntBASIC27.12■■□□□ 1.93
CCDC187A0A096LP49 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC187A0A096LP49 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC187A0A096LP49 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC187A0A096LP49 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC187A0A096LP49 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC187A0A096LP49 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC187A0A096LP49 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.03■■□□□ 1.92
CCDC187A0A096LP49 CAHM-201ENST00000604200 896 ntBASIC27.02■■□□□ 1.92
CCDC187A0A096LP49 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC187A0A096LP49 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC187A0A096LP49 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
CCDC187A0A096LP49 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.99■■□□□ 1.91
CCDC187A0A096LP49 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC187A0A096LP49 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CCDC187A0A096LP49 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
CCDC187A0A096LP49 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.94■■□□□ 1.9
CCDC187A0A096LP49 AL391121.1-201ENST00000607967 1349 ntBASIC26.92■■□□□ 1.9
CCDC187A0A096LP49 AP006261.1-201ENST00000584783 668 ntBASIC26.91■■□□□ 1.9
CCDC187A0A096LP49 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC187A0A096LP49 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC187A0A096LP49 AL162393.1-201ENST00000437852 946 ntBASIC26.9■■□□□ 1.9
CCDC187A0A096LP49 AL133380.1-201ENST00000506013 324 ntBASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms