Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
IGKV2-28A0A075B6P5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
IGKV2-28A0A075B6P5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV2-28A0A075B6P5 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV2-28A0A075B6P5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
IGKV2-28A0A075B6P5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV2-28A0A075B6P5 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
IGKV2-28A0A075B6P5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IGKV2-28A0A075B6P5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV2-28A0A075B6P5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV2-28A0A075B6P5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV2-28A0A075B6P5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV2-28A0A075B6P5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
IGKV2-28A0A075B6P5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV2-28A0A075B6P5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV2-28A0A075B6P5 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV2-28A0A075B6P5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV2-28A0A075B6P5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV2-28A0A075B6P5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC18.91■□□□□ 0.62
IGKV2-28A0A075B6P5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
IGKV2-28A0A075B6P5 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV2-28A0A075B6P5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV2-28A0A075B6P5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.89■□□□□ 0.61
IGKV2-28A0A075B6P5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC18.87■□□□□ 0.61
IGKV2-28A0A075B6P5 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
IGKV2-28A0A075B6P5 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
IGKV2-28A0A075B6P5 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV2-28A0A075B6P5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.84■□□□□ 0.61
IGKV2-28A0A075B6P5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
IGKV2-28A0A075B6P5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IGKV2-28A0A075B6P5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IGKV2-28A0A075B6P5 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV2-28A0A075B6P5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV2-28A0A075B6P5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
IGKV2-28A0A075B6P5 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV2-28A0A075B6P5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
IGKV2-28A0A075B6P5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV2-28A0A075B6P5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV2-28A0A075B6P5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGKV2-28A0A075B6P5 AC145285.7-201ENST00000614819 1539 ntBASIC18.77■□□□□ 0.6
IGKV2-28A0A075B6P5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV2-28A0A075B6P5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.75■□□□□ 0.59
IGKV2-28A0A075B6P5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGKV2-28A0A075B6P5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV2-28A0A075B6P5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV2-28A0A075B6P5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV2-28A0A075B6P5 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV2-28A0A075B6P5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.7■□□□□ 0.58
IGKV2-28A0A075B6P5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV2-28A0A075B6P5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.68■□□□□ 0.58
IGKV2-28A0A075B6P5 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IGKV2-28A0A075B6P5 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV2-28A0A075B6P5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV2-28A0A075B6P5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IGKV2-28A0A075B6P5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IGKV2-28A0A075B6P5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGKV2-28A0A075B6P5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGKV2-28A0A075B6P5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IGKV2-28A0A075B6P5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
IGKV2-28A0A075B6P5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGKV2-28A0A075B6P5 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IGKV2-28A0A075B6P5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGKV2-28A0A075B6P5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.56■□□□□ 0.56
IGKV2-28A0A075B6P5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGKV2-28A0A075B6P5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGKV2-28A0A075B6P5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGKV2-28A0A075B6P5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGKV2-28A0A075B6P5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGKV2-28A0A075B6P5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IGKV2-28A0A075B6P5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IGKV2-28A0A075B6P5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGKV2-28A0A075B6P5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGKV2-28A0A075B6P5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV2-28A0A075B6P5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV2-28A0A075B6P5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV2-28A0A075B6P5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV2-28A0A075B6P5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV2-28A0A075B6P5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV2-28A0A075B6P5 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV2-28A0A075B6P5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV2-28A0A075B6P5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV2-28A0A075B6P5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV2-28A0A075B6P5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV2-28A0A075B6P5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV2-28A0A075B6P5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
IGKV2-28A0A075B6P5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV2-28A0A075B6P5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV2-28A0A075B6P5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.44■□□□□ 0.54
IGKV2-28A0A075B6P5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV2-28A0A075B6P5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV2-28A0A075B6P5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV2-28A0A075B6P5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.42■□□□□ 0.54
IGKV2-28A0A075B6P5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV2-28A0A075B6P5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV2-28A0A075B6P5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
IGKV2-28A0A075B6P5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGKV2-28A0A075B6P5 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGKV2-28A0A075B6P5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGKV2-28A0A075B6P5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGKV2-28A0A075B6P5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms