Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.81□□□□□ -0.04
DTX4Q9Y2E6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 AC055876.3-201ENST00000431496 288 ntBASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 AC138649.4-201ENST00000612222 287 ntBASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 AC100757.3-201ENST00000622361 1406 ntBASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
DTX4Q9Y2E6 CICP13-201ENST00000422015 2789 ntBASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.79□□□□□ -0.04
DTX4Q9Y2E6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms