Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 AC009947.1-201ENST00000444350 727 ntBASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 AC112693.3-201ENST00000624819 1983 ntBASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 AC005829.1-201ENST00000570002 483 ntBASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCM2LQ9NUG4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 AC011477.6-201ENST00000604980 1927 ntBASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 AC064836.3-201ENST00000607928 673 ntBASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCM2LQ9NUG4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCM2LQ9NUG4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCM2LQ9NUG4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCM2LQ9NUG4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCM2LQ9NUG4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCM2LQ9NUG4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCM2LQ9NUG4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCM2LQ9NUG4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms