Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 KLF2P3-201ENST00000451977 1087 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AC003101.2-201ENST00000612557 442 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AC084121.4-201ENST00000641598 221 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AF228730.8-201ENST00000642140 221 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AL031731.1-201ENST00000642131 2094 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AC092384.3-202ENST00000564646 2873 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 LINC01144-201ENST00000626198 1710 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 AC126755.1-201ENST00000525846 6405 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 MIR943-201ENST00000401286 94 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 AC107890.1-201ENST00000422478 521 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 POU5F1P6-201ENST00000466990 990 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 IGHV3-42-201ENST00000520410 361 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 AL512356.2-201ENST00000546955 174 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 DUX4L27-201ENST00000554796 1261 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 GPAA1P2-202ENST00000606848 1787 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 GGT4P-201ENST00000623672 1708 ntBASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PCGF1Q9BSM1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms