Protein–RNA interactions for Protein: Q96PL1

SCGB3A2, Secretoglobin family 3A member 2, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A2Q96PL1 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SCGB3A2Q96PL1 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 CICP23-201ENST00000605013 2741 ntBASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 TOB2P1-201ENST00000469761 992 ntBASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 AC092329.2-201ENST00000598402 547 ntBASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.51□□□□□ -0.25
SCGB3A2Q96PL1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 AP001282.1-201ENST00000531301 1499 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 AC106881.1-201ENST00000605849 3329 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 RCN1P1-201ENST00000400413 996 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 PTCHD3P3-201ENST00000403073 906 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 KRT18P57-201ENST00000443599 1254 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 TSSC2-201ENST00000450217 709 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 SLC25A6P2-201ENST00000497974 877 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 AC104819.1-201ENST00000504587 486 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 AL591684.3-201ENST00000605187 298 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 GGTLC5P-201ENST00000617623 998 ntBASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCGB3A2Q96PL1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms