Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.95□□□□□ -0.5
RNF183Q96D59 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.95□□□□□ -0.5
RNF183Q96D59 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.95□□□□□ -0.5
RNF183Q96D59 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.95□□□□□ -0.5
RNF183Q96D59 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.95□□□□□ -0.5
RNF183Q96D59 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RNF183Q96D59 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.95□□□□□ -0.5
RNF183Q96D59 MIR4453-201ENST00000584019 89 ntBASIC11.95□□□□□ -0.5
RNF183Q96D59 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.95□□□□□ -0.5
RNF183Q96D59 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.95□□□□□ -0.5
RNF183Q96D59 AL158211.3-201ENST00000607385 239 ntBASIC11.95□□□□□ -0.5
RNF183Q96D59 AC003101.2-201ENST00000612557 442 ntBASIC11.95□□□□□ -0.5
RNF183Q96D59 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.95□□□□□ -0.5
RNF183Q96D59 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RNF183Q96D59 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RNF183Q96D59 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RNF183Q96D59 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RNF183Q96D59 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.94□□□□□ -0.5
RNF183Q96D59 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 AC024909.3-201ENST00000611513 2257 ntBASIC11.94□□□□□ -0.5
RNF183Q96D59 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.94□□□□□ -0.5
RNF183Q96D59 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 AC006538.1-201ENST00000567905 1585 ntBASIC11.94□□□□□ -0.5
RNF183Q96D59 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.94□□□□□ -0.5
RNF183Q96D59 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
RNF183Q96D59 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.94□□□□□ -0.5
RNF183Q96D59 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 BCRP1-201ENST00000444246 691 ntBASIC11.94□□□□□ -0.5
RNF183Q96D59 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.94□□□□□ -0.5
RNF183Q96D59 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 IGHV3-42-201ENST00000520410 361 ntBASIC11.94□□□□□ -0.5
RNF183Q96D59 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.94□□□□□ -0.5
RNF183Q96D59 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.94□□□□□ -0.5
RNF183Q96D59 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.94□□□□□ -0.5
RNF183Q96D59 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RNF183Q96D59 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.94□□□□□ -0.5
RNF183Q96D59 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.94□□□□□ -0.5
RNF183Q96D59 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RNF183Q96D59 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF183Q96D59 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RNF183Q96D59 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
RNF183Q96D59 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RNF183Q96D59 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 AC007950.2-201ENST00000615045 2347 ntBASIC11.93□□□□□ -0.5
RNF183Q96D59 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RNF183Q96D59 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF183Q96D59 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 AL137784.3-201ENST00000623858 2288 ntBASIC11.93□□□□□ -0.5
RNF183Q96D59 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF183Q96D59 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF183Q96D59 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RNF183Q96D59 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF183Q96D59 GPAA1P2-202ENST00000606848 1787 ntBASIC11.93□□□□□ -0.5
RNF183Q96D59 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
RNF183Q96D59 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
RNF183Q96D59 FOXO1B-201ENST00000504678 1527 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms