Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 MIR346-201ENST00000362234 95 ntBASIC14.05□□□□□ -0.16
SPTSSAQ969W0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 KRT8P48-201ENST00000515599 1220 ntBASIC14.05□□□□□ -0.16
SPTSSAQ969W0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 AC026979.3-201ENST00000607315 403 ntBASIC14.05□□□□□ -0.16
SPTSSAQ969W0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 FOXO1B-201ENST00000504678 1527 ntBASIC14.05□□□□□ -0.16
SPTSSAQ969W0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 AC134407.2-201ENST00000625089 1978 ntBASIC14.04□□□□□ -0.16
SPTSSAQ969W0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 AL592309.1-201ENST00000443127 649 ntBASIC14.04□□□□□ -0.16
SPTSSAQ969W0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 AC005829.1-201ENST00000570002 483 ntBASIC14.04□□□□□ -0.16
SPTSSAQ969W0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 AC097376.2-205ENST00000610159 5334 ntBASIC14.04□□□□□ -0.16
SPTSSAQ969W0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSAQ969W0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 MYO15B-237ENST00000642007 4893 ntBASIC14.03□□□□□ -0.16
SPTSSAQ969W0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms