Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 TSPY19P-201ENST00000418461 509 ntBASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 TSPY18P-201ENST00000441642 509 ntBASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 AC112693.3-201ENST00000624819 1983 ntBASIC15.95■□□□□ 0.14
NUDCD3Q8IVD9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 SAPCD2P3-201ENST00000455031 850 ntBASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 AL031432.2-201ENST00000566714 459 ntBASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 AL928711.1-201ENST00000570165 459 ntBASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 AC004790.2-201ENST00000623588 572 ntBASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 AP001282.1-201ENST00000531301 1499 ntBASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 C18orf15-201ENST00000623680 2534 ntBASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUDCD3Q8IVD9 AC097376.2-205ENST00000610159 5334 ntBASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 AC091951.1-201ENST00000512854 2465 ntBASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms