Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 ZNF259P1-201ENST00000407656 1365 ntBASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 RPL13AP23-201ENST00000480739 586 ntBASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AC091167.2-201ENST00000579581 588 ntBASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AC005412.3-201ENST00000580309 715 ntBASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 BX640515.1-201ENST00000617215 977 ntBASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AP001350.2-201ENST00000625104 1094 ntBASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 CICP8-201ENST00000455800 2813 ntBASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM53Q6P2H8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 DGCR9-201ENST00000609630 2415 ntBASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 PPT1-215ENST00000641471 2368 ntBASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM53Q6P2H8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 VN2R19P-201ENST00000442399 1052 ntBASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 REXO1L3P-201ENST00000622202 1288 ntBASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM53Q6P2H8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 AL353732.1-201ENST00000569618 1459 ntBASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 AC104109.2-201ENST00000602919 1418 ntBASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms