Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 FAM86MP-201ENST00000340703 885 ntBASIC16.8■□□□□ 0.28
LMNAP02545 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.8■□□□□ 0.28
LMNAP02545 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
LMNAP02545 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 AC092552.1-201ENST00000547243 906 ntBASIC16.8■□□□□ 0.28
LMNAP02545 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LMNAP02545 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LMNAP02545 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.8■□□□□ 0.28
LMNAP02545 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 AC003101.2-201ENST00000612557 442 ntBASIC16.8■□□□□ 0.28
LMNAP02545 AC018529.1-201ENST00000613063 361 ntBASIC16.8■□□□□ 0.28
LMNAP02545 SPTSSB-204ENST00000617024 1292 ntBASIC16.8■□□□□ 0.28
LMNAP02545 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LMNAP02545 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LMNAP02545 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.79■□□□□ 0.28
LMNAP02545 AL391825.1-201ENST00000457671 1364 ntBASIC16.79■□□□□ 0.28
LMNAP02545 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.79■□□□□ 0.28
LMNAP02545 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.79■□□□□ 0.28
LMNAP02545 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.79■□□□□ 0.28
LMNAP02545 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.79■□□□□ 0.28
LMNAP02545 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.79■□□□□ 0.28
LMNAP02545 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.79■□□□□ 0.28
LMNAP02545 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.79■□□□□ 0.28
LMNAP02545 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LMNAP02545 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.79■□□□□ 0.28
LMNAP02545 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.79■□□□□ 0.28
LMNAP02545 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 REXO1L6P-201ENST00000603433 1515 ntBASIC16.79■□□□□ 0.28
LMNAP02545 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LMNAP02545 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
LMNAP02545 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.79■□□□□ 0.28
LMNAP02545 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMNAP02545 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
LMNAP02545 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNAP02545 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LMNAP02545 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNAP02545 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.78■□□□□ 0.28
LMNAP02545 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMNAP02545 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMNAP02545 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMNAP02545 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.78■□□□□ 0.28
LMNAP02545 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms