Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 AC004233.3-201ENST00000607794 1269 ntBASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 AL138828.2-201ENST00000615812 383 ntBASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 AL035252.4-201ENST00000624174 288 ntBASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 ALOX12P2-203ENST00000570921 1945 ntBASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CCNYL3P0C7X3 AC022144.1-201ENST00000602255 1580 ntBASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 AC092364.2-201ENST00000596710 2692 ntBASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 AC005052.1-201ENST00000625181 2492 ntBASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 MIR661-201ENST00000384842 89 ntBASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PIN1P1-201ENST00000412108 996 ntBASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 AL589739.1-201ENST00000607720 493 ntBASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 SPDYE12P-201ENST00000618416 771 ntBASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCNYL3P0C7X3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms