RNA–Protein interactions for RNA: ENST00000497198.1

PDC-202, Transcript of phosducin, humanhuman

TSL 1 (best) BASIC

Gene PDC, Length 1,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDC-202ENST00000497198 AEBP2Q6ZN18 517 aaPredicted RBP39.92■■■■□ 3.98
PDC-202ENST00000497198 CHIC1Q5VXU3 224 aa38.85■■■■□ 3.81
PDC-202ENST00000497198 PHF23Q9BUL5 403 aaPredicted RBP34.09■■■■□ 3.05
PDC-202ENST00000497198 SENP3Q9H4L4 574 aaPredicted RBP34■■■■□ 3.03
PDC-202ENST00000497198 FOXD1Q16676 465 aa31.53■■■□□ 2.64
PDC-202ENST00000497198 PLPPR3Q6T4P5 718 aa31.5■■■□□ 2.63
PDC-202ENST00000497198 PPP6R1Q9UPN7 881 aa30.14■■■□□ 2.42
PDC-202ENST00000497198 ADRA2BP18089 450 aa30.12■■■□□ 2.41
PDC-202ENST00000497198 PIAS4Q8N2W9 510 aaPredicted RBP29.72■■■□□ 2.35
PDC-202ENST00000497198 MSH5O43196 834 aa29.22■■■□□ 2.27
PDC-202ENST00000497198 PPP4R3CPQ6ZMV5 832 aa27.7■■■□□ 2.02
PDC-202ENST00000497198 SCAF1Q9H7N4 1312 aaKnown RBP27.67■■■□□ 2.02
PDC-202ENST00000497198 MAPK8IP2Q13387 824 aaPredicted RBP27.37■■□□□ 1.97
PDC-202ENST00000497198 DMRT2Q9Y5R5 561 aa27.09■■□□□ 1.93
PDC-202ENST00000497198 CNKSR2Q8WXI2 1034 aa26.99■■□□□ 1.91
PDC-202ENST00000497198 NCBP3Q53F19 620 aaKnown RBP26.97■■□□□ 1.91
PDC-202ENST00000497198 POTEDQ86YR6 584 aa26.91■■□□□ 1.9
PDC-202ENST00000497198 KCNA4P22459 653 aa26.79■■□□□ 1.88
PDC-202ENST00000497198 NPM3O75607 178 aaKnown RBP26.51■■□□□ 1.83
PDC-202ENST00000497198 RNF216Q9NWF9 866 aaPredicted RBP26.51■■□□□ 1.83
PDC-202ENST00000497198 HOXD11P31277 338 aaPredicted RBP26.45■■□□□ 1.82
PDC-202ENST00000497198 DCAF8L1A6NGE4 600 aa25.94■■□□□ 1.74
PDC-202ENST00000497198 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
PDC-202ENST00000497198 SLC4A1APQ9BWU0 796 aaKnown RBP25.52■■□□□ 1.68
PDC-202ENST00000497198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.22■■□□□ 1.63
PDC-202ENST00000497198 SLC4A2P04920 1241 aa25.05■■□□□ 1.6
PDC-202ENST00000497198 RNF39Q9H2S5 420 aa24.98■■□□□ 1.59
PDC-202ENST00000497198 FOXD4L1Q9NU39 408 aa24.77■■□□□ 1.56
PDC-202ENST00000497198 U3KPZ7 1027 aaPredicted RBP24.76■■□□□ 1.55
PDC-202ENST00000497198 C1QBPQ07021 282 aaKnown RBP24.7■■□□□ 1.54
PDC-202ENST00000497198 ZBTB22O15209 634 aa24.63■■□□□ 1.53
PDC-202ENST00000497198 MYCNP04198 464 aaPredicted RBP24.55■■□□□ 1.52
PDC-202ENST00000497198 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
PDC-202ENST00000497198 CACNB1Q02641 598 aaPredicted RBP24.49■■□□□ 1.51
PDC-202ENST00000497198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
PDC-202ENST00000497198 HNRNPUL2Q1KMD3 747 aaKnown RBP24.47■■□□□ 1.51
PDC-202ENST00000497198 SAMD1Q6SPF0 538 aaPredicted RBP24.35■■□□□ 1.49
PDC-202ENST00000497198 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
PDC-202ENST00000497198 APLP2Q06481 763 aa24.28■■□□□ 1.48
PDC-202ENST00000497198 SPINK5Q9NQ38 1064 aaPredicted RBP24.11■■□□□ 1.45
PDC-202ENST00000497198 CAPN15O75808 1086 aa24.07■■□□□ 1.44
PDC-202ENST00000497198 ATXN8OSP0DMR3 200 aa23.95■■□□□ 1.42
PDC-202ENST00000497198 ZNF219Q9P2Y4 722 aaPredicted RBP23.93■■□□□ 1.42
PDC-202ENST00000497198 TRHP20396 242 aaPredicted RBP23.9■■□□□ 1.42
PDC-202ENST00000497198 ATF5Q9Y2D1 282 aaPredicted RBP23.82■■□□□ 1.4
PDC-202ENST00000497198 DSG3P32926 999 aa23.69■■□□□ 1.38
PDC-202ENST00000497198 ABCB7O75027 752 aa23.57■■□□□ 1.36
PDC-202ENST00000497198 POLA2Q14181 598 aa23.46■■□□□ 1.35
PDC-202ENST00000497198 ZBTB12Q9Y330 459 aaPredicted RBP23.13■■□□□ 1.29
PDC-202ENST00000497198 FBLN2P98095 1184 aa22.94■■□□□ 1.26
PDC-202ENST00000497198 MKRN4PQ13434 485 aaPredicted RBP22.79■■□□□ 1.24
PDC-202ENST00000497198 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
PDC-202ENST00000497198 RBM42Q9BTD8 480 aaKnown RBP22.65■■□□□ 1.22
PDC-202ENST00000497198 SPDYE2BA6NHP3 402 aa22.45■■□□□ 1.18
PDC-202ENST00000497198 SPDYE6P0CI01 402 aa22.45■■□□□ 1.18
PDC-202ENST00000497198 SPDYE2Q495Y8 402 aa22.45■■□□□ 1.18
PDC-202ENST00000497198 ZNF692Q9BU19 519 aaPredicted RBP22.32■■□□□ 1.16
PDC-202ENST00000497198 AKT1S1Q96B36 256 aa22.3■■□□□ 1.16
PDC-202ENST00000497198 SPDYE4A6NLX3 237 aa22.23■■□□□ 1.15
PDC-202ENST00000497198 SSUH2Q9Y2M2 353 aa22.23■■□□□ 1.15
PDC-202ENST00000497198 REM2Q8IYK8 340 aaPredicted RBP22.06■■□□□ 1.12
PDC-202ENST00000497198 FKBP8Q14318 412 aa22.05■■□□□ 1.12
PDC-202ENST00000497198 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
PDC-202ENST00000497198 SPDYE1Q8NFV5 336 aaPredicted RBP21.85■■□□□ 1.09
PDC-202ENST00000497198 PROM2Q8N271 834 aa21.82■■□□□ 1.08
PDC-202ENST00000497198 PITPNM1O00562 1244 aa21.81■■□□□ 1.08
PDC-202ENST00000497198 CHRDL2Q6WN34 429 aa21.74■■□□□ 1.07
PDC-202ENST00000497198 CLEC11AQ9Y240 323 aa21.74■■□□□ 1.07
PDC-202ENST00000497198 STAG3Q9UJ98 1225 aa21.66■■□□□ 1.06
PDC-202ENST00000497198 PRR29P0C7W0 189 aa21.52■■□□□ 1.04
PDC-202ENST00000497198 FXR2P51116 673 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDC-202ENST00000497198 PIP4P2Q8N4L2 257 aa21.41■■□□□ 1.02
PDC-202ENST00000497198 FBXO3Q9UK99 471 aa21.38■■□□□ 1.01
PDC-202ENST00000497198 POTEHQ6S545 545 aa21.29■■□□□ 1
PDC-202ENST00000497198 PRKAR2AP13861 404 aaKnown RBP21.27■■□□□ 1
PDC-202ENST00000497198 CHADLQ6NUI6 762 aa21.19■□□□□ 0.98
PDC-202ENST00000497198 CREBZFQ9NS37 354 aa21.16■□□□□ 0.98
PDC-202ENST00000497198 MIER1Q8N108 512 aa21.11■□□□□ 0.97
PDC-202ENST00000497198 PLEKHG5O94827 1062 aa21.09■□□□□ 0.97
PDC-202ENST00000497198 PLCD3Q8N3E9 789 aa21.07■□□□□ 0.96
PDC-202ENST00000497198 VASPP50552 380 aaPredicted RBP21.05■□□□□ 0.96
PDC-202ENST00000497198 FARP1Q9Y4F1 1045 aaPredicted RBP21■□□□□ 0.95
PDC-202ENST00000497198 MNX1P50219 401 aaPredicted RBP20.91■□□□□ 0.94
PDC-202ENST00000497198 ZBTB47Q9UFB7 747 aaPredicted RBP20.9■□□□□ 0.94
PDC-202ENST00000497198 NPM1P06748 294 aaKnown RBP eCLIP20.88■□□□□ 0.93
PDC-202ENST00000497198 HAX1O00165 279 aa20.79■□□□□ 0.92
PDC-202ENST00000497198 KLHL34Q8N239 644 aa20.76■□□□□ 0.91
PDC-202ENST00000497198 C19orf67A6NJJ6 358 aa20.72■□□□□ 0.91
PDC-202ENST00000497198 IFNLR1Q8IU57 520 aaPredicted RBP20.72■□□□□ 0.91
PDC-202ENST00000497198 CD44P16070 742 aaKnown RBP20.66■□□□□ 0.9
PDC-202ENST00000497198 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
PDC-202ENST00000497198 NUBP1P53384 320 aa20.56■□□□□ 0.88
PDC-202ENST00000497198 SPOCK2Q92563 424 aa20.55■□□□□ 0.88
PDC-202ENST00000497198 EVX2Q03828 476 aa20.53■□□□□ 0.88
PDC-202ENST00000497198 RASEFQ8IZ41 740 aa20.52■□□□□ 0.88
PDC-202ENST00000497198 ZRANB1Q9UGI0 708 aa20.5■□□□□ 0.87
PDC-202ENST00000497198 TSPYL2Q9H2G4 693 aaPredicted RBP20.47■□□□□ 0.87
PDC-202ENST00000497198 FAM212AQ96EL1 285 aa20.46■□□□□ 0.87
PDC-202ENST00000497198 SP7Q8TDD2 431 aaPredicted RBP20.39■□□□□ 0.85
PDC-202ENST00000497198 ZNF579Q8NAF0 562 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms