Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 TPRX2P-201ENST00000535362 881 ntBASIC15.9■□□□□ 0.14
PCDHGA12O60330 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 AC004461.2-201ENST00000629517 803 ntBASIC15.9■□□□□ 0.14
PCDHGA12O60330 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA12O60330 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA12O60330 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 AC112492.5-201ENST00000421897 457 ntBASIC15.89■□□□□ 0.13
PCDHGA12O60330 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.89■□□□□ 0.13
PCDHGA12O60330 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGA12O60330 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA12O60330 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms