Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 PPT1-215ENST00000641471 2368 ntBASIC14.14□□□□□ -0.15
NPIPB4C9JG80 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB4C9JG80 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 CNN2P11-201ENST00000429351 262 ntBASIC14.13□□□□□ -0.15
NPIPB4C9JG80 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 AC003101.2-201ENST00000612557 442 ntBASIC14.13□□□□□ -0.15
NPIPB4C9JG80 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.13□□□□□ -0.15
NPIPB4C9JG80 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 AC127383.1-201ENST00000444697 1800 ntBASIC14.13□□□□□ -0.15
NPIPB4C9JG80 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB4C9JG80 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AC004967.1-201ENST00000453589 447 ntBASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 MIR6080-201ENST00000617359 66 ntBASIC14.12□□□□□ -0.15
NPIPB4C9JG80 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms