Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 VENTXP1-201ENST00000569334 2716 ntBASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 NT5C3AP1-201ENST00000394500 1012 ntBASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 AC005829.2-201ENST00000571422 1056 ntBASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 AC023090.2-201ENST00000625182 2110 ntBASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 LINC01144-201ENST00000626198 1710 ntBASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 AC107375.1-201ENST00000564464 2231 ntBASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 AL022323.5-201ENST00000624101 2059 ntBASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LINC01558Q9Y6Z2 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms