Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB5BP61020 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB5BP61020 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 AC004980.1-204ENST00000429707 299 ntBASIC12.57□□□□□ -0.4
RAB5BP61020 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 AF201337.1-201ENST00000520239 748 ntBASIC12.57□□□□□ -0.4
RAB5BP61020 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RAB5BP61020 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB5BP61020 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB5BP61020 MIR6821-201ENST00000617625 74 ntBASIC12.57□□□□□ -0.4
RAB5BP61020 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RAB5BP61020 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5BP61020 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RAB5BP61020 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RAB5BP61020 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5BP61020 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 MEX3B-202ENST00000558133 4333 ntBASIC12.56□□□□□ -0.4
RAB5BP61020 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RAB5BP61020 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
RAB5BP61020 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.56□□□□□ -0.4
RAB5BP61020 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 AC006015.1-201ENST00000429970 570 ntBASIC12.56□□□□□ -0.4
RAB5BP61020 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB5BP61020 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB5BP61020 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.56□□□□□ -0.4
RAB5BP61020 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.56□□□□□ -0.4
RAB5BP61020 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.56□□□□□ -0.4
RAB5BP61020 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RAB5BP61020 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms