Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 AC022188.1-201ENST00000620960 1664 ntBASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
TRGV1A0A0A0MS02 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 FAM86C2P-203ENST00000528684 1004 ntBASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 AL603832.2-201ENST00000566195 2125 ntBASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 AC099522.2-201ENST00000607001 744 ntBASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV1A0A0A0MS02 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 LINC02447-202ENST00000501888 2146 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 AL365203.3-201ENST00000609742 2057 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CICP6-201ENST00000457191 2729 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 AC067750.1-201ENST00000608826 6545 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 MIR574-201ENST00000385209 96 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms