Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AC092919.2-201ENST00000623631 1645 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 KRT17P6-201ENST00000453795 1220 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 MINOS1P3-201ENST00000457048 203 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 TOB2P1-201ENST00000469761 992 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 STK19B-204ENST00000512515 211 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AP002414.4-201ENST00000589764 1148 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AD001527.2-201ENST00000622994 785 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AP000550.4-202ENST00000639755 178 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AC117489.1-201ENST00000625169 3217 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AC010327.5-201ENST00000586923 3061 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 AC009336.1-201ENST00000608941 1553 ntBASIC14.68□□□□□ -0.06
HMG20AQ9NP66 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
HMG20AQ9NP66 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 AC003669.1-201ENST00000334569 611 ntBASIC14.67□□□□□ -0.06
HMG20AQ9NP66 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMG20AQ9NP66 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms