Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC067863.1-201ENST00000494933 530 ntBASIC14.92□□□□□ -0.02
UBQLN3Q9H347 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.91□□□□□ -0.02
UBQLN3Q9H347 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 AC008677.1-201ENST00000519230 1561 ntBASIC14.91□□□□□ -0.02
UBQLN3Q9H347 AP3S2-216ENST00000617003 1561 ntBASIC14.91□□□□□ -0.02
UBQLN3Q9H347 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 HMGN1P19-201ENST00000436976 333 ntBASIC14.91□□□□□ -0.02
UBQLN3Q9H347 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 FAM86GP-201ENST00000448322 971 ntBASIC14.91□□□□□ -0.02
UBQLN3Q9H347 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 RARRES2P9-201ENST00000565168 469 ntBASIC14.91□□□□□ -0.02
UBQLN3Q9H347 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.91□□□□□ -0.02
UBQLN3Q9H347 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 AC104640.1-201ENST00000562617 2109 ntBASIC14.9□□□□□ -0.02
UBQLN3Q9H347 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 AC103702.1-201ENST00000548801 2630 ntBASIC14.9□□□□□ -0.02
UBQLN3Q9H347 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 AC069224.1-201ENST00000566372 1715 ntBASIC14.9□□□□□ -0.02
UBQLN3Q9H347 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBQLN3Q9H347 FAM220BP-201ENST00000377689 816 ntBASIC14.9□□□□□ -0.02
UBQLN3Q9H347 HLA-H-201ENST00000383620 1096 ntBASIC14.9□□□□□ -0.02
UBQLN3Q9H347 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms