Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 MRPL20P1-201ENST00000400819 433 ntBASIC14.37□□□□□ -0.11
LRRC28Q86X40 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.37□□□□□ -0.11
LRRC28Q86X40 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 VN2R19P-201ENST00000442399 1052 ntBASIC14.37□□□□□ -0.11
LRRC28Q86X40 RNA5SP416-201ENST00000516838 111 ntBASIC14.37□□□□□ -0.11
LRRC28Q86X40 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 KRT8P39-201ENST00000396270 1433 ntBASIC14.37□□□□□ -0.11
LRRC28Q86X40 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 AC092919.2-201ENST00000623631 1645 ntBASIC14.37□□□□□ -0.11
LRRC28Q86X40 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.36□□□□□ -0.11
LRRC28Q86X40 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 MIR4751-201ENST00000578027 74 ntBASIC14.36□□□□□ -0.11
LRRC28Q86X40 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.36□□□□□ -0.11
LRRC28Q86X40 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.36□□□□□ -0.11
LRRC28Q86X40 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRC28Q86X40 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRC28Q86X40 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRC28Q86X40 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRC28Q86X40 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms