Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AC010327.4-202ENST00000591484 748 ntBASIC19.2■□□□□ 0.66
RNF20Q5VTR2 AC026979.3-201ENST00000607315 403 ntBASIC19.2■□□□□ 0.66
RNF20Q5VTR2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF20Q5VTR2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 UPF3AP3-201ENST00000420996 769 ntBASIC19.19■□□□□ 0.66
RNF20Q5VTR2 RPS8P6-201ENST00000426177 609 ntBASIC19.19■□□□□ 0.66
RNF20Q5VTR2 AC112482.1-201ENST00000492080 688 ntBASIC19.19■□□□□ 0.66
RNF20Q5VTR2 AP000344.2-201ENST00000512987 629 ntBASIC19.19■□□□□ 0.66
RNF20Q5VTR2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 RARRES2P9-201ENST00000565168 469 ntBASIC19.19■□□□□ 0.66
RNF20Q5VTR2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.19■□□□□ 0.66
RNF20Q5VTR2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF20Q5VTR2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.18■□□□□ 0.66
RNF20Q5VTR2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 AP003680.1-201ENST00000598970 3660 ntBASIC19.18■□□□□ 0.66
RNF20Q5VTR2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 RPSAP43-201ENST00000402237 625 ntBASIC19.18■□□□□ 0.66
RNF20Q5VTR2 KRT18P32-201ENST00000424695 1287 ntBASIC19.18■□□□□ 0.66
RNF20Q5VTR2 AL139010.1-201ENST00000454878 894 ntBASIC19.18■□□□□ 0.66
RNF20Q5VTR2 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF20Q5VTR2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 AC004461.1-201ENST00000412461 403 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms