Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX6-1P78426 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 AL138918.1-201ENST00000568306 659 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 SPDYE22P-201ENST00000582158 798 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 AC027307.2-201ENST00000591252 911 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 AC073389.1-201ENST00000595595 795 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX6-1P78426 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-1P78426 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 GGT4P-201ENST00000623672 1708 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-1P78426 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
NKX6-1P78426 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
NKX6-1P78426 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NKX6-1P78426 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.23□□□□□ -0.13
NKX6-1P78426 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX6-1P78426 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 AC004890.2-204ENST00000481968 304 ntBASIC14.23□□□□□ -0.13
NKX6-1P78426 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.23□□□□□ -0.13
NKX6-1P78426 AP000842.3-202ENST00000569238 1080 ntBASIC14.23□□□□□ -0.13
NKX6-1P78426 MIR4453-201ENST00000584019 89 ntBASIC14.23□□□□□ -0.13
NKX6-1P78426 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.23□□□□□ -0.13
NKX6-1P78426 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NKX6-1P78426 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.23□□□□□ -0.13
NKX6-1P78426 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NKX6-1P78426 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.23□□□□□ -0.13
NKX6-1P78426 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NKX6-1P78426 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NKX6-1P78426 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-1P78426 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NKX6-1P78426 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
NKX6-1P78426 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NKX6-1P78426 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
NKX6-1P78426 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-1P78426 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 GPAA1P2-202ENST00000606848 1787 ntBASIC14.22□□□□□ -0.13
NKX6-1P78426 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
NKX6-1P78426 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX6-1P78426 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX6-1P78426 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
NKX6-1P78426 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NKX6-1P78426 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-1P78426 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.22□□□□□ -0.13
NKX6-1P78426 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms