Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.75□□□□□ -0.05
RFC3P40938 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 AC005034.1-201ENST00000426657 489 ntBASIC14.75□□□□□ -0.05
RFC3P40938 AC009477.1-201ENST00000452936 217 ntBASIC14.75□□□□□ -0.05
RFC3P40938 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.75□□□□□ -0.05
RFC3P40938 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.75□□□□□ -0.05
RFC3P40938 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.75□□□□□ -0.05
RFC3P40938 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.75□□□□□ -0.05
RFC3P40938 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RFC3P40938 AC239800.4-201ENST00000603712 296 ntBASIC14.75□□□□□ -0.05
RFC3P40938 AC009118.2-201ENST00000613275 655 ntBASIC14.75□□□□□ -0.05
RFC3P40938 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.75□□□□□ -0.05
RFC3P40938 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.75□□□□□ -0.05
RFC3P40938 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFC3P40938 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 U82695.1-201ENST00000635752 1889 ntBASIC14.74□□□□□ -0.05
RFC3P40938 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RFC3P40938 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.74□□□□□ -0.05
RFC3P40938 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 AL512361.1-201ENST00000554200 418 ntBASIC14.74□□□□□ -0.05
RFC3P40938 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 AC004840.1-201ENST00000636359 365 ntBASIC14.74□□□□□ -0.05
RFC3P40938 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.74□□□□□ -0.05
RFC3P40938 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.74□□□□□ -0.05
RFC3P40938 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFC3P40938 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.73□□□□□ -0.05
RFC3P40938 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.73□□□□□ -0.05
RFC3P40938 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.73□□□□□ -0.05
RFC3P40938 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.73□□□□□ -0.05
RFC3P40938 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFC3P40938 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFC3P40938 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms