Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.54■□□□□ 0.56
R3HCC1Q9Y3T6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 AP002414.1-201ENST00000391405 1147 ntBASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 PTCHD3P3-201ENST00000403073 906 ntBASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 AL805961.1-202ENST00000641562 540 ntBASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.53■□□□□ 0.56
R3HCC1Q9Y3T6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 AL590787.1-201ENST00000568856 1315 ntBASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 AC073621.1-201ENST00000392730 636 ntBASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 RPL13AP23-201ENST00000480739 586 ntBASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 AC117500.6-201ENST00000624871 588 ntBASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
R3HCC1Q9Y3T6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
R3HCC1Q9Y3T6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
R3HCC1Q9Y3T6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.52■□□□□ 0.55
R3HCC1Q9Y3T6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.52■□□□□ 0.55
R3HCC1Q9Y3T6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
R3HCC1Q9Y3T6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
R3HCC1Q9Y3T6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
R3HCC1Q9Y3T6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
R3HCC1Q9Y3T6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
R3HCC1Q9Y3T6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms