Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 CYP2T1P-202ENST00000641596 2535 ntBASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AC008741.2-201ENST00000612792 3115 ntBASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 GK-202ENST00000378941 458 ntTSL 3 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 RARRES2P9-201ENST00000565168 469 ntBASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AC003101.2-201ENST00000612557 442 ntBASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 AL589702.1-201ENST00000641229 1509 ntBASIC14.82□□□□□ -0.04
RPH3AQ9Y2J0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 AC008677.1-201ENST00000519230 1561 ntBASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 U82695.1-201ENST00000635752 1889 ntBASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 HLA-H-201ENST00000383620 1096 ntBASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 FAM86GP-201ENST00000448322 971 ntBASIC14.81□□□□□ -0.04
RPH3AQ9Y2J0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms