Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 CTSL-202ENST00000342020 933 ntTSL 2 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 LINC00634-202ENST00000505157 222 ntBASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 POLD4-208ENST00000532830 904 ntTSL 3 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC24.72■■□□□ 1.55
RIMBP3Q9UFD9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 AC023141.7-201ENST00000430646 407 ntBASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 HLA-J-204ENST00000495278 958 ntBASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 AC092299.1-201ENST00000632679 757 ntBASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RIMBP3Q9UFD9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RIMBP3Q9UFD9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
RIMBP3Q9UFD9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RIMBP3Q9UFD9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.7■■□□□ 1.54
RIMBP3Q9UFD9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 AC004837.1-201ENST00000446267 564 ntBASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 PMEL-214ENST00000550447 901 ntTSL 3 BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RIMBP3Q9UFD9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CHCHD2P9-201ENST00000461726 456 ntBASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 MIR4522-201ENST00000584932 87 ntBASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 MIR4472-1-201ENST00000584349 80 ntBASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 AL450472.2-201ENST00000603663 1156 ntBASIC24.68■■□□□ 1.54
RIMBP3Q9UFD9 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms