Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
SLC46A1Q96NT5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 FO393414.2-201ENST00000405153 598 ntBASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 AC104989.1-201ENST00000519711 778 ntBASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 FAM8A2P-201ENST00000528813 1142 ntBASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 BTNL10-201ENST00000595971 695 ntBASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 CLK3P2-201ENST00000427566 1453 ntBASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SLC46A1Q96NT5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 KRT43P-201ENST00000434019 910 ntBASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 CROCCP4-201ENST00000457096 498 ntBASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AC025048.3-201ENST00000590609 569 ntBASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AC005702.4-201ENST00000618393 416 ntBASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC46A1Q96NT5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms