Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 BANF1P1-201ENST00000553684 263 ntBASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 AL691432.1-201ENST00000596308 1422 ntBASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC148Q8NFR7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 AL596257.1-201ENST00000641463 2694 ntBASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 AC092183.1-201ENST00000469884 875 ntBASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 AL603832.2-201ENST00000566195 2125 ntBASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 CDC14C-201ENST00000428251 1719 ntBASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC148Q8NFR7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 AC024909.3-201ENST00000611513 2257 ntBASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 TUBB3P1-201ENST00000405796 1332 ntBASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 AC004987.2-201ENST00000395959 1148 ntBASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 FAM86GP-201ENST00000448322 971 ntBASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 CYP4F24P-201ENST00000586049 1580 ntBASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC148Q8NFR7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms