Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DEFA3P59666 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DEFA3P59666 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DEFA3P59666 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DEFA3P59666 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DEFA3P59666 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.16□□□□□ -0.14
DEFA3P59666 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DEFA3P59666 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
DEFA3P59666 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DEFA3P59666 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DEFA3P59666 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 MBLAC2-202ENST00000514906 1936 ntBASIC14.15□□□□□ -0.14
DEFA3P59666 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
DEFA3P59666 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 AC116562.2-201ENST00000507042 360 ntBASIC14.15□□□□□ -0.14
DEFA3P59666 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.15□□□□□ -0.14
DEFA3P59666 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.15□□□□□ -0.14
DEFA3P59666 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
DEFA3P59666 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
DEFA3P59666 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
DEFA3P59666 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.15□□□□□ -0.14
DEFA3P59666 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.15□□□□□ -0.14
DEFA3P59666 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DEFA3P59666 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.15□□□□□ -0.15
DEFA3P59666 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
DEFA3P59666 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
DEFA3P59666 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.14□□□□□ -0.15
DEFA3P59666 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.14□□□□□ -0.15
DEFA3P59666 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
DEFA3P59666 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
DEFA3P59666 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.14□□□□□ -0.15
DEFA3P59666 AP002414.1-201ENST00000391405 1147 ntBASIC14.14□□□□□ -0.15
DEFA3P59666 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
DEFA3P59666 KRT18P48-201ENST00000434763 852 ntBASIC14.14□□□□□ -0.15
DEFA3P59666 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.14□□□□□ -0.15
DEFA3P59666 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.14□□□□□ -0.15
DEFA3P59666 AP003733.1-201ENST00000491725 852 ntBASIC14.14□□□□□ -0.15
DEFA3P59666 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
DEFA3P59666 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.14□□□□□ -0.15
DEFA3P59666 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.14□□□□□ -0.15
DEFA3P59666 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
DEFA3P59666 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.14□□□□□ -0.15
DEFA3P59666 AL359881.3-201ENST00000602640 1721 ntBASIC14.14□□□□□ -0.15
DEFA3P59666 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
DEFA3P59666 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
DEFA3P59666 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms