Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MIR1224-201ENST00000408193 85 ntBASIC15.74■□□□□ 0.11
HIPK4Q8NE63 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 KRT16P4-201ENST00000453883 522 ntBASIC15.74■□□□□ 0.11
HIPK4Q8NE63 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIPK4Q8NE63 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 ATP5G2P1-201ENST00000433580 426 ntBASIC15.73■□□□□ 0.11
HIPK4Q8NE63 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 BX005266.1-201ENST00000473402 457 ntBASIC15.73■□□□□ 0.11
HIPK4Q8NE63 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 AP001269.4-201ENST00000609611 512 ntBASIC15.73■□□□□ 0.11
HIPK4Q8NE63 AL022326.1-202ENST00000641533 845 ntBASIC15.73■□□□□ 0.11
HIPK4Q8NE63 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.73■□□□□ 0.11
HIPK4Q8NE63 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 AL359258.3-201ENST00000622910 2331 ntBASIC15.73■□□□□ 0.11
HIPK4Q8NE63 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HIPK4Q8NE63 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 POU5F1P6-201ENST00000466990 990 ntBASIC15.72■□□□□ 0.11
HIPK4Q8NE63 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 AC092119.3-201ENST00000612618 583 ntBASIC15.72■□□□□ 0.11
HIPK4Q8NE63 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HIPK4Q8NE63 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms