Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 SPTLC1P5-201ENST00000450718 252 ntBASIC21.81■■□□□ 1.08
XRN1Q8IZH2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
XRN1Q8IZH2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 AC126915.1-201ENST00000522847 1038 ntBASIC21.8■■□□□ 1.08
XRN1Q8IZH2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 BX539320.1-201ENST00000623759 877 ntBASIC21.8■■□□□ 1.08
XRN1Q8IZH2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 AL138799.1-201ENST00000448213 1675 ntBASIC21.8■■□□□ 1.08
XRN1Q8IZH2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
XRN1Q8IZH2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 AL354877.1-201ENST00000424412 413 ntBASIC21.79■■□□□ 1.08
XRN1Q8IZH2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 ME2P1-201ENST00000426028 1970 ntBASIC21.79■■□□□ 1.08
XRN1Q8IZH2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
XRN1Q8IZH2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 AC007274.2-201ENST00000421675 662 ntBASIC21.78■■□□□ 1.08
XRN1Q8IZH2 NKAIN1P1-201ENST00000435754 582 ntBASIC21.78■■□□□ 1.08
XRN1Q8IZH2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC21.78■■□□□ 1.08
XRN1Q8IZH2 RN7SL769P-201ENST00000469386 295 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms