Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 ITM2C-210ENST00000620962 501 ntBASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 AC141257.4-201ENST00000634557 245 ntBASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 AC136944.6-201ENST00000634818 245 ntBASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 REXO1L8P-201ENST00000604378 1897 ntBASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CROCCP3Q8IVE0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AC125634.1-201ENST00000438758 1403 ntBASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 HSPA7-201ENST00000445535 1927 ntBASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 MIR662-201ENST00000384847 95 ntBASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 Z99916.2-201ENST00000604037 246 ntBASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AL031432.5-201ENST00000641059 760 ntBASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AC140479.7-201ENST00000636301 2332 ntBASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CROCCP3Q8IVE0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms