Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
PDE6DO43924 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 KRT17P2-201ENST00000300992 1314 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PDE6DO43924 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PDE6DO43924 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 AC007686.3-201ENST00000619017 3487 ntBASIC12.54□□□□□ -0.4
PDE6DO43924 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 MIR718-201ENST00000390190 70 ntBASIC12.54□□□□□ -0.4
PDE6DO43924 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 AC246785.2-201ENST00000432512 513 ntBASIC12.54□□□□□ -0.4
PDE6DO43924 COX11P1-201ENST00000489116 835 ntBASIC12.54□□□□□ -0.4
PDE6DO43924 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.54□□□□□ -0.4
PDE6DO43924 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 AP001350.2-201ENST00000625104 1094 ntBASIC12.54□□□□□ -0.4
PDE6DO43924 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PDE6DO43924 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PDE6DO43924 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PDE6DO43924 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.54□□□□□ -0.4
PDE6DO43924 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.53□□□□□ -0.4
PDE6DO43924 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PDE6DO43924 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
PDE6DO43924 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PDE6DO43924 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.53□□□□□ -0.4
PDE6DO43924 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms