Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 FO393412.1-201ENST00000619841 382 ntBASIC26.95■■□□□ 1.91
CUX2O14529 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CUX2O14529 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CUX2O14529 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CUX2O14529 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CUX2O14529 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CUX2O14529 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CUX2O14529 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC26.94■■□□□ 1.9
CUX2O14529 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
CUX2O14529 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC26.94■■□□□ 1.9
CUX2O14529 AC005740.2-201ENST00000511085 419 ntBASIC26.94■■□□□ 1.9
CUX2O14529 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC26.94■■□□□ 1.9
CUX2O14529 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 AC022748.3-201ENST00000621828 275 ntBASIC26.94■■□□□ 1.9
CUX2O14529 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
CUX2O14529 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC26.94■■□□□ 1.9
CUX2O14529 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CUX2O14529 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC26.94■■□□□ 1.9
CUX2O14529 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CUX2O14529 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CUX2O14529 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC26.94■■□□□ 1.9
CUX2O14529 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CUX2O14529 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 MPV17-205ENST00000402310 906 ntTSL 5 BASIC26.93■■□□□ 1.9
CUX2O14529 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC26.93■■□□□ 1.9
CUX2O14529 AP002490.2-201ENST00000524791 560 ntBASIC26.93■■□□□ 1.9
CUX2O14529 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC26.93■■□□□ 1.9
CUX2O14529 AC107373.2-201ENST00000607735 490 ntBASIC26.93■■□□□ 1.9
CUX2O14529 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CUX2O14529 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC26.93■■□□□ 1.9
CUX2O14529 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC26.93■■□□□ 1.9
CUX2O14529 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC26.93■■□□□ 1.9
CUX2O14529 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC26.93■■□□□ 1.9
CUX2O14529 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC26.93■■□□□ 1.9
CUX2O14529 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC26.93■■□□□ 1.9
CUX2O14529 AC242376.1-201ENST00000559033 726 ntBASIC26.93■■□□□ 1.9
CUX2O14529 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CUX2O14529 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CUX2O14529 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC26.92■■□□□ 1.9
CUX2O14529 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CUX2O14529 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC26.92■■□□□ 1.9
CUX2O14529 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
CUX2O14529 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CUX2O14529 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CUX2O14529 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC26.92■■□□□ 1.9
CUX2O14529 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC26.92■■□□□ 1.9
CUX2O14529 NEU3-205ENST00000531619 582 ntTSL 5 BASIC26.92■■□□□ 1.9
CUX2O14529 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC26.92■■□□□ 1.9
CUX2O14529 RN7SL713P-201ENST00000582127 302 ntBASIC26.92■■□□□ 1.9
CUX2O14529 AC012044.1-201ENST00000603431 297 ntBASIC26.92■■□□□ 1.9
CUX2O14529 AP005019.2-201ENST00000615104 511 ntBASIC26.92■■□□□ 1.9
CUX2O14529 ETV2-208ENST00000621247 941 ntTSL 5 BASIC26.92■■□□□ 1.9
CUX2O14529 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CUX2O14529 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
CUX2O14529 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
CUX2O14529 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CUX2O14529 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CUX2O14529 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CUX2O14529 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC26.91■■□□□ 1.9
CUX2O14529 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC26.91■■□□□ 1.9
CUX2O14529 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
CUX2O14529 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CUX2O14529 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC26.91■■□□□ 1.9
CUX2O14529 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CUX2O14529 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CUX2O14529 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CUX2O14529 PIN4P1-201ENST00000451079 396 ntBASIC26.91■■□□□ 1.9
CUX2O14529 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC26.91■■□□□ 1.9
CUX2O14529 IGLV3-15-201ENST00000518356 244 ntBASIC26.91■■□□□ 1.9
CUX2O14529 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC26.91■■□□□ 1.9
CUX2O14529 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC26.91■■□□□ 1.9
CUX2O14529 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC26.91■■□□□ 1.9
CUX2O14529 AC138466.4-201ENST00000623965 852 ntBASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms