Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 POU5F1P3-201ENST00000428824 1078 ntBASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 AC131281.2-201ENST00000520478 145 ntBASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 HSPA7-201ENST00000445535 1927 ntBASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 HLA-A-202ENST00000376806 1854 ntBASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CHKB-CPT1BH3BT56 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 AC092117.1-201ENST00000621230 3250 ntBASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms