RNA–Protein interactions for RNA: ENST00000557772.5

ESR2-213, Transcript of estrogen receptor 2, humanhuman

TSL 1 (best) BASIC

Gene ESR2, Length 5,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR2-213ENST00000557772 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
ESR2-213ENST00000557772 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
ESR2-213ENST00000557772 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
ESR2-213ENST00000557772 SHROOM4Q9ULL8 1493 aa21.62■■□□□ 1.05
ESR2-213ENST00000557772 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
ESR2-213ENST00000557772 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
ESR2-213ENST00000557772 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
ESR2-213ENST00000557772 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
ESR2-213ENST00000557772 APLP2Q06481 763 aa20.12■□□□□ 0.81
ESR2-213ENST00000557772 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
ESR2-213ENST00000557772 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
ESR2-213ENST00000557772 ZEB1P37275 1124 aaPredicted RBP19.94■□□□□ 0.78
ESR2-213ENST00000557772 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
ESR2-213ENST00000557772 ABCC9O60706 1549 aa19.77■□□□□ 0.76
ESR2-213ENST00000557772 UBTFP17480 764 aaKnown RBP19.73■□□□□ 0.75
ESR2-213ENST00000557772 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
ESR2-213ENST00000557772 TTBK1Q5TCY1 1321 aaPredicted RBP19.68■□□□□ 0.74
ESR2-213ENST00000557772 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
ESR2-213ENST00000557772 LOC105371045A0A1W2PR82 267 aa19.58■□□□□ 0.72
ESR2-213ENST00000557772 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
ESR2-213ENST00000557772 HRCP23327 699 aa19.53■□□□□ 0.72
ESR2-213ENST00000557772 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
ESR2-213ENST00000557772 SCRIBQ14160 1630 aa19.39■□□□□ 0.7
ESR2-213ENST00000557772 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
ESR2-213ENST00000557772 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
ESR2-213ENST00000557772 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
ESR2-213ENST00000557772 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
ESR2-213ENST00000557772 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
ESR2-213ENST00000557772 NACADO15069 1562 aa19.09■□□□□ 0.65
ESR2-213ENST00000557772 RB1CC1Q8TDY2 1594 aa19.07■□□□□ 0.64
ESR2-213ENST00000557772 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
ESR2-213ENST00000557772 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
ESR2-213ENST00000557772 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
ESR2-213ENST00000557772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.87■□□□□ 0.61
ESR2-213ENST00000557772 ITGAEP38570 1179 aa18.84■□□□□ 0.61
ESR2-213ENST00000557772 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
ESR2-213ENST00000557772 MYO15BQ96JP2 1530 aa18.77■□□□□ 0.59
ESR2-213ENST00000557772 NEFLP07196 543 aa18.7■□□□□ 0.58
ESR2-213ENST00000557772 DIEXFQ68CQ4 756 aaKnown RBP18.68■□□□□ 0.58
ESR2-213ENST00000557772 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
ESR2-213ENST00000557772 EEA1Q15075 1411 aa18.62■□□□□ 0.57
ESR2-213ENST00000557772 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
ESR2-213ENST00000557772 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
ESR2-213ENST00000557772 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
ESR2-213ENST00000557772 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
ESR2-213ENST00000557772 GOLGA3Q08378 1498 aa18.46■□□□□ 0.54
ESR2-213ENST00000557772 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
ESR2-213ENST00000557772 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
ESR2-213ENST00000557772 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
ESR2-213ENST00000557772 CLIP1P30622 1438 aa18.38■□□□□ 0.53
ESR2-213ENST00000557772 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
ESR2-213ENST00000557772 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
ESR2-213ENST00000557772 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
ESR2-213ENST00000557772 NEUROD1Q13562 356 aa18.34■□□□□ 0.53
ESR2-213ENST00000557772 P3H3Q8IVL6 736 aa18.33■□□□□ 0.53
ESR2-213ENST00000557772 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
ESR2-213ENST00000557772 MYT1Q01538 1121 aa18.32■□□□□ 0.52
ESR2-213ENST00000557772 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
ESR2-213ENST00000557772 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
ESR2-213ENST00000557772 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
ESR2-213ENST00000557772 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
ESR2-213ENST00000557772 KIF27Q86VH2 1401 aa18.22■□□□□ 0.51
ESR2-213ENST00000557772 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
ESR2-213ENST00000557772 WIZO95785 1651 aa18.21■□□□□ 0.51
ESR2-213ENST00000557772 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
ESR2-213ENST00000557772 FBLN2P98095 1184 aa18.19■□□□□ 0.5
ESR2-213ENST00000557772 ANP32CO43423 234 aa18.18■□□□□ 0.5
ESR2-213ENST00000557772 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
ESR2-213ENST00000557772 GTF3C3Q9Y5Q9 886 aa18.12■□□□□ 0.49
ESR2-213ENST00000557772 SOGA1O94964 1423 aa18.1■□□□□ 0.49
ESR2-213ENST00000557772 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
ESR2-213ENST00000557772 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
ESR2-213ENST00000557772 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
ESR2-213ENST00000557772 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.48
ESR2-213ENST00000557772 ARID3CA6NKF2 412 aa18.02■□□□□ 0.48
ESR2-213ENST00000557772 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
ESR2-213ENST00000557772 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
ESR2-213ENST00000557772 ZNF326Q5BKZ1 582 aaKnown RBP17.96■□□□□ 0.47
ESR2-213ENST00000557772 ZNF777Q9ULD5 760 aaPredicted RBP17.95■□□□□ 0.46
ESR2-213ENST00000557772 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
ESR2-213ENST00000557772 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
ESR2-213ENST00000557772 CUX2O14529 1486 aa17.9■□□□□ 0.46
ESR2-213ENST00000557772 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
ESR2-213ENST00000557772 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
ESR2-213ENST00000557772 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
ESR2-213ENST00000557772 DAXXQ9UER7 740 aaPredicted RBP17.82■□□□□ 0.44
ESR2-213ENST00000557772 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
ESR2-213ENST00000557772 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
ESR2-213ENST00000557772 CCNB3Q8WWL7 1395 aa17.78■□□□□ 0.44
ESR2-213ENST00000557772 DDX10Q13206 875 aaKnown RBP17.78■□□□□ 0.44
ESR2-213ENST00000557772 BCANQ96GW7 911 aa17.76■□□□□ 0.43
ESR2-213ENST00000557772 MIER1Q8N108 512 aa17.74■□□□□ 0.43
ESR2-213ENST00000557772 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
ESR2-213ENST00000557772 TSPY4P0CV99 314 aa17.72■□□□□ 0.43
ESR2-213ENST00000557772 TSPY10P0CW01 314 aa17.72■□□□□ 0.43
ESR2-213ENST00000557772 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
ESR2-213ENST00000557772 RRP7BPQ9NSQ0 103 aa17.67■□□□□ 0.42
ESR2-213ENST00000557772 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
ESR2-213ENST00000557772 PLEKHD1A6NEE1 506 aa17.65■□□□□ 0.42
ESR2-213ENST00000557772 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms