Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 AL139010.1-201ENST00000454878 894 ntBASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 AC106028.4-201ENST00000614509 607 ntBASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SCUBE3Q8IX30 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SCUBE3Q8IX30 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCUBE3Q8IX30 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCUBE3Q8IX30 AC112504.1-201ENST00000623415 1841 ntBASIC16.96■□□□□ 0.3
SCUBE3Q8IX30 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.96■□□□□ 0.3
SCUBE3Q8IX30 AC069224.1-201ENST00000566372 1715 ntBASIC16.96■□□□□ 0.3
SCUBE3Q8IX30 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCUBE3Q8IX30 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 CNN2P2-201ENST00000443536 909 ntBASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 CNN2P3-201ENST00000450201 906 ntBASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 AC026979.3-201ENST00000607315 403 ntBASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 AL136317.3-201ENST00000618497 906 ntBASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCUBE3Q8IX30 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms